RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 A0A1B0GUS0 222 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 SOX21Q9Y651 276 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-201ENST00000314191 FABP5P3A8MUU1 101 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF25P17030 456 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-201ENST00000314191 PMCHL1Q16048 86 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 ZFP30Q9Y2G7 519 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 LSM4Q9Y4Z0 139 aaKnown RBP4.95□□□□□ -1.62
PRKDC-201ENST00000314191 SRD5A1P18405 259 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 ACTL10Q5JWF8 245 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 NRN1Q9NPD7 142 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 NOTCH4Q99466 2003 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 KLK15Q9H2R5 256 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 ATP6V0E1O15342 81 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 BTF3P20290 206 aaKnown RBP4.94□□□□□ -1.62
PRKDC-201ENST00000314191 PAX8Q06710 450 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 JOSD1Q15040 202 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-201ENST00000314191 OR10AG1Q8NH19 301 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 SLC25A2Q9BXI2 301 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 LY96Q9Y6Y9 160 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 LINC00614P0C842 121 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 DAZAP2Q15038 168 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-201ENST00000314191 HSPB8Q9UJY1 196 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 B4DSR2 109 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 E7EUB6 86 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 SP5Q6BEB4 398 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-201ENST00000314191 SHANK2-AS3Q9BTD1 123 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 AP5S1Q9NUS5 200 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 PHLDA3Q9Y5J5 127 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 TOMM40O96008 361 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 MORN5Q5VZ52 161 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 MAP1LC3AQ9H492 121 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 SLC50A1Q9BRV3 221 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 TMEM70Q9BUB7 260 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 PRSS22Q9GZN4 317 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 NDUFS8O00217 210 aa4.94□□□□□ -1.62
PRKDC-201ENST00000314191 A0A1B0GV90 55 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 IGLC1P0CG04 106 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 GBF1Q92538 1859 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 A0A1W2PRX2 142 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 PCP4P48539 62 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 C17orf77Q96MU5 243 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 SNAI2O43623 268 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 PCDH15Q96QU1 1955 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 PSG3Q16557 428 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 MRPL36Q9P0J6 103 aaKnown RBP4.93□□□□□ -1.62
PRKDC-201ENST00000314191 OVOL3O00110 214 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 LYZL1Q6UWQ5 148 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 ASIPP42127 132 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 ERCC8Q13216 396 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 FAM74A4Q5TZK3 123 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 ST6GALNAC6Q969X2 333 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 NUP35Q8NFH5 326 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 V9GYV3 84 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF324O75467 553 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-201ENST00000314191 PRB1P04280 392 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 EML5Q05BV3 1969 aa4.93□□□□□ -1.62
PRKDC-201ENST00000314191 IGLV1-47P01700 117 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 C11orf52Q96A22 123 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF491Q8N8L2 437 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 OR4C46A6NHA9 309 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 RPLP1P05386 114 aaKnown RBP4.92□□□□□ -1.62
PRKDC-201ENST00000314191 NIT1Q86X76 327 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 IGKV1OR2-108A0A075B7D4 117 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV2-70DA0A0C4DH43 119 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 IGLC7A0M8Q6 106 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 SH2D1AO60880 128 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 PATE2Q6UY27 113 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 NCR2O95944 276 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 FXYD7P58549 80 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 C21orf62-AS1Q17RA5 79 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 TMEM97Q5BJF2 176 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 P0C879 139 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 Q6AWC8 147 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 LCNL1Q6ZST4 164 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 TRBV19A0A075B6N1 114 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 RNF223E7ERA6 249 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 CTAG1AP78358 180 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 SNRPD3P62318 126 aaKnown RBP4.92□□□□□ -1.62
PRKDC-201ENST00000314191 SLC25A34Q6PIV7 304 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 Q8N7P7 452 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 THAP8Q8NA92 274 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 Q86TA4 180 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 DMRTC2Q8IXT2 367 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-201ENST00000314191 ATP5L2Q7Z4Y8 100 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF138P52744 262 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 SIGLEC15Q6ZMC9 328 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 FAM110DQ8TAY7 271 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-201ENST00000314191 YAE1D1Q9NRH1 226 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 UQCR10Q9UDW1 63 aa4.92□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV1-69DA0A0B4J2H0 117 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV1-69P01742 117 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 PRDM13Q9H4Q3 707 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 K7EN84 100 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 IGLV2-23P01705 113 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 C8orf31Q8N9H6 132 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms