RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 LCTP09848 1927 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 DUTP33316 252 aaKnown RBP10.37□□□□□ -0.75
USP38-201ENST00000307017 RALGAPA2Q2PPJ7 1873 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 NABP1Q96AH0 204 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 A0A0G2JRQ6 117 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 IQCF6A8MYZ5 107 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 C5orf47Q569G3 176 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 TMEM144Q7Z5S9 345 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 CYYR1Q96J86 154 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 COL4A6Q14031 1691 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 PSPNO60542 156 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 FAM231BA6NCW3 169 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 LINC00473A8K010 186 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 NXPH4O95158 308 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 HSD52Q0P140 79 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 ARHGAP21Q5T5U3 1957 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 IGHV1-46P01743 117 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 C20orf204Q6ZNR8 217 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 ATP6V0BQ99437 205 aa10.36□□□□□ -0.75
USP38-201ENST00000307017 TINCRA0A1B0GVN0 87 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 SUPT4H1P63272 117 aaKnown RBP10.35□□□□□ -0.75
USP38-201ENST00000307017 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 LINC00312Q9Y6C7 94 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 DYSFO75923 2080 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 NEU4Q8WWR8 484 aaPredicted RBP10.35□□□□□ -0.75
USP38-201ENST00000307017 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 AGMATQ9BSE5 352 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 REG4Q9BYZ8 158 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 IGHV2-26A0A0B4J1V2 119 aa10.35□□□□□ -0.75
USP38-201ENST00000307017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
USP38-201ENST00000307017 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
USP38-201ENST00000307017 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 IL17RELQ6ZVW7 336 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 NEUROG3Q9Y4Z2 214 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 C9JQL5 133 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
USP38-201ENST00000307017 E9PLN8 166 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 TM4SF5O14894 197 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 RIPPLY2Q5TAB7 128 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 DOCK7Q96N67 2140 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 CFHR1Q03591 330 aa10.34□□□□□ -0.75
USP38-201ENST00000307017 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
USP38-201ENST00000307017 A0A087WX48 190 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 CHCHD1Q96BP2 118 aaKnown RBP10.33□□□□□ -0.76
USP38-201ENST00000307017 FAM90A1Q86YD7 464 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 RPP25LQ8N5L8 163 aaKnown RBP10.33□□□□□ -0.76
USP38-201ENST00000307017 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 SYS1-DBNDD2H3BUS1 97 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 THBDP07204 575 aa10.33□□□□□ -0.76
USP38-201ENST00000307017 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 COX5BP10606 129 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 DUX4L9Q6RFH8 374 aaPredicted RBP10.32□□□□□ -0.76
USP38-201ENST00000307017 TRPM7Q96QT4 1865 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 MST1P26927 711 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 FAM57AQ8TBR7 257 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 CHD3Q12873 2000 aaKnown RBP10.32□□□□□ -0.76
USP38-201ENST00000307017 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 SS18L2Q9UHA2 77 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 F2Z2F3 143 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 WNT2P09544 360 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 YPEL1O60688 119 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
USP38-201ENST00000307017 YPEL2Q96QA6 119 aa10.32□□□□□ -0.76
USP38-201ENST00000307017 A0A1W2PR77 199 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 TMEM86BQ8N661 226 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 A0A1B0GW15 77 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 IGKV1-16P04430 117 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 CD5P06127 495 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 LINC00114Q6XXX2 140 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 AHCTF1Q8WYP5 2266 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 IGHV1-3A0A0C4DH29 117 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 GAGE4Q13068 117 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 GAGE5Q13069 117 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 H3BUX3 64 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 COL8A2P25067 703 aa10.31□□□□□ -0.76
USP38-201ENST00000307017 C1orf194Q5T5A4 169 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms