RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RPL7P18124 248 aaKnown RBP13.49□□□□□ -0.25
KRT28-201ENST00000306658 FAM90A2PQ658T7 463 aa13.49□□□□□ -0.25
KRT28-201ENST00000306658 CCDC28AQ8IWP9 274 aa13.49□□□□□ -0.25
KRT28-201ENST00000306658 BLNKQ8WV28 456 aa13.49□□□□□ -0.25
KRT28-201ENST00000306658 NF1P21359 2839 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 CLPSL1A2RUU4 121 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 TCF21O43680 179 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 CRLF1O75462 422 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 SNAPINO95295 136 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 LGALS1P09382 135 aaKnown RBP13.48□□□□□ -0.25
KRT28-201ENST00000306658 SUMO1P63165 101 aaKnown RBP13.48□□□□□ -0.25
KRT28-201ENST00000306658 GUCA2BQ16661 112 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 OR8I2Q8N0Y5 310 aa13.48□□□□□ -0.25
KRT28-201ENST00000306658 CRYBB3P26998 211 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 FAM74A3Q4VXF1 159 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 GPR82Q96P67 336 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 BUB3O43684 328 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 SNRPCP09234 159 aaKnown RBP13.47□□□□□ -0.25
KRT28-201ENST00000306658 CDX1P47902 265 aaPredicted RBP13.47□□□□□ -0.25
KRT28-201ENST00000306658 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
KRT28-201ENST00000306658 C1orf194Q5T5A4 169 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 RPUSD4Q96CM3 377 aaKnown RBP13.47□□□□□ -0.25
KRT28-201ENST00000306658 ZNF586Q9NXT0 402 aa13.47□□□□□ -0.25
KRT28-201ENST00000306658 ZNF320A2RRD8 509 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 ZNF727A8MUV8 499 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 GGTLC3B5MD39 225 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 H3BQ15 152 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 MRPS12O15235 138 aaKnown RBP13.46□□□□□ -0.26
KRT28-201ENST00000306658 NDUFA7O95182 113 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 IGLC2P0DOY2 106 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 RPEL1Q2QD12 228 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 LINC01006Q8NI28 216 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 SMIM7Q9BQ49 75 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 PARLQ9H300 379 aa13.46□□□□□ -0.26
KRT28-201ENST00000306658 SETXQ7Z333 2677 aaKnown RBP13.46□□□□□ -0.26
KRT28-201ENST00000306658 ZNF207O43670 478 aaKnown RBP13.45□□□□□ -0.26
KRT28-201ENST00000306658 NDUFB4O95168 129 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 ZNF674Q2M3X9 581 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 UNQ9165/PRO28630Q6UXU0 137 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 TMEM190Q8WZ59 177 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 TCEAL7Q9BRU2 100 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 U3KQE9 123 aa13.45□□□□□ -0.26
KRT28-201ENST00000306658 F8P00451 2351 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 SCO2A0A1W2PP80 73 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 PDE6HQ13956 83 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 WIPF2Q8TF74 440 aaPredicted RBP13.44□□□□□ -0.26
KRT28-201ENST00000306658 WFDC12Q8WWY7 111 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 C11orf52Q96A22 123 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
KRT28-201ENST00000306658 PGPA6NDG6 321 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 H3BTX0 84 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 MYCNOSP40205 109 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 TCTEX1D4Q5JR98 221 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 LYPD1Q8N2G4 141 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 CLRN3Q8NCR9 226 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 ELOVL1Q9BW60 279 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 Q9H3A6 140 aa13.44□□□□□ -0.26
KRT28-201ENST00000306658 A0A1W2PS18 150 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 K7EMT4 169 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 M0R036 132 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 ATF4P18848 351 aaPredicted RBP13.43□□□□□ -0.26
KRT28-201ENST00000306658 GALR1P47211 349 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 TMEM241Q24JQ0 296 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 KHDC1LQ5JSQ8 128 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 C4orf3Q8WVX3 66 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 GRAMD2BQ96HH9 432 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 DAZ1Q9NQZ3 744 aaKnown RBP13.43□□□□□ -0.26
KRT28-201ENST00000306658 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
KRT28-201ENST00000306658 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
KRT28-201ENST00000306658 PNRC1Q12796 327 aaPredicted RBP13.42□□□□□ -0.26
KRT28-201ENST00000306658 HIST1H2BAQ96A08 127 aa13.42□□□□□ -0.26
KRT28-201ENST00000306658 NAT8Q9UHE5 227 aa13.42□□□□□ -0.26
KRT28-201ENST00000306658 UFC1Q9Y3C8 167 aa13.42□□□□□ -0.26
KRT28-201ENST00000306658 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 IGHV3-66A0A0C4DH42 116 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 SLC25A5P05141 298 aaKnown RBP13.41□□□□□ -0.26
KRT28-201ENST00000306658 ATRAIDQ6UW56 229 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 C5orf17Q8NAS9 161 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 C17orf77Q96MU5 243 aa13.41□□□□□ -0.26
KRT28-201ENST00000306658 IGHV4OR15-8A0A075B7B6 117 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 A0A087WW49 117 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 ZNF785A8K8V0 405 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 MEOX2P50222 304 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 PSG9Q00887 426 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 C16orf54Q6UWD8 224 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 AAMDCQ9H7C9 122 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 SDF2L1Q9HCN8 221 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 EPDR1Q9UM22 224 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 SMAD5-AS1Q9Y6J3 95 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 CUBNO60494 3623 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 A0A087X0K7 114 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms