RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PRR20BP86481 221 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PRR20AP86496 221 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZNF266Q14584 549 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LEMD1Q68G75 181 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SLC39A9Q9NUM3 307 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 MEGF8Q7Z7M0 2845 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PSMG4Q5JS54 123 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 STHQ8IWL8 128 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 FAM24BQ8N5W8 94 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 AQP10Q96PS8 301 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 AGRNO00468 2067 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RPL35AP18077 110 aaKnown RBP8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PSMB3P49720 205 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 HAGHQ16775 308 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PATE2Q6UY27 113 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 BPIFA4PQ86YQ2 179 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LRRC20Q8TCA0 184 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RSG1Q9BU20 258 aa8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PARD6GQ9BYG4 376 aaPredicted RBP8.16□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ISLRO14498 428 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZNF124Q15973 351 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 Q5BKY6 102 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 FFAR4Q5NUL3 377 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 TMEM37Q8WXS4 190 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LINC00052Q96N35 136 aa8.15□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 A0A087X0K7 114 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KIR2DL5BA0A0G2JN68 375 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KIR2DL5BA0A0G2JPC4 375 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 UBE2CO00762 179 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 CXCL2P19875 107 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ACTL10Q5JWF8 245 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KIR2DL5AQ8N109 375 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KIR2DL5BQ8NHK3 375 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RCHY1Q96PM5 261 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TM2D3Q9BRN9 247 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MRPL32Q9BYC8 188 aaKnown RBP8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TNFSF18Q9UNG2 199 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 U3KQK5 164 aa8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SOCS3O14543 225 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ARPC5O15511 151 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ACOT6Q3I5F7 207 aaPredicted RBP8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 LCN15Q6UWW0 184 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SLC50A1Q9BRV3 221 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RPRMQ9NS64 109 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SMLR1H3BR10 107 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SPP1P10451 314 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 NUTF2P61970 127 aaKnown RBP8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 GCSAMLQ5JQS6 135 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MORN5Q5VZ52 161 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 EBLN2Q6P2I7 272 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 FOXI2Q6ZQN5 318 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 HSD17B11Q8NBQ5 300 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ZNF738Q8NE65 137 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 CSTL1Q9H114 145 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RETNQ9HD89 108 aa8.12□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 G3V3Q6 166 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TAAR5O14804 337 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MRPS12O15235 138 aaKnown RBP8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 CA1P00915 261 aaPredicted RBP8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TAS2R45P59539 299 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RHOBP62745 196 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 GUK1Q16774 197 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 DEFB135Q30KP9 77 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TMEM41BQ5BJD5 291 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SPATA31B1PQ5VZV4 182 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MORN3Q6PF18 240 aaPredicted RBP8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 Q6ZNX1 250 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 HRH4Q9H3N8 390 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SAV1Q9H4B6 383 aaPredicted RBP8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 FUT9Q9Y231 359 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TRAV5A0A0B4J249 113 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 A0A1W2PPV4 95 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 OR7C2O60412 319 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 M6PRP20645 277 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ZNF345Q14585 488 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms