RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CFHR2P36980 270 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 Q6ZS49 121 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 IGHV1-8P0DP01 117 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 MST1P26927 711 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 UBE2E1P51965 193 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 IGFBP2P18065 325 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 IGHV2-26A0A0B4J1V2 119 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 PSPNO60542 156 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 AMBPP02760 352 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 PSG1P11464 419 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 APOC4P55056 127 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 CRYBA2P53672 197 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 COQ2Q96H96 371 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 CGAP01215 116 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 FOXA3P55318 350 aaPredicted RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 TMEM187Q14656 261 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 FBXL19-AS1Q494R0 122 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 MIXL1Q9H2W2 232 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 ELF5Q9UKW6 265 aaPredicted RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 CHTOPQ9Y3Y2 248 aaKnown RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 WFDC6Q9BQY6 131 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 IZUMO1RA6ND01 250 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 SRSF4Q08170 494 aaKnown RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 DANCRP0C864 163 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
PCDHB1-201ENST00000306549 MDKP21741 143 aaPredicted RBP6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 RFLNBQ8N5W9 214 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 LEPROTO15243 131 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 C5orf66Q9H5L9 145 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 IGHV3OR16-8A0A075B7F1 116 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 J3QRE1 110 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 MGST2Q99735 147 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 JMJD1CQ15652 2540 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 LYPD3O95274 346 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 LINC00614P0C842 121 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 E7EQL1 145 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 KAAG1Q9UBP8 84 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 FNDC10F2Z333 226 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 CA1P00915 261 aaPredicted RBP6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 DAZAP2Q15038 168 aaPredicted RBP6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
PCDHB1-201ENST00000306549 HIGD1CA8MV81 97 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 CBLN1P23435 193 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 PIP4P2Q8N4L2 257 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 ZNF837Q96EG3 531 aaPredicted RBP6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 TPTE2P1Q5T6R2 138 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 TNRC6BQ9UPQ9 1833 aaKnown RBP6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 NAT1P18440 290 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 DAD1P61803 113 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 IFITM2Q01629 132 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 FAM90A2PQ658T7 463 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 SMPXQ9UHP9 88 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 ARTNQ5T4W7 220 aa6.84□□□□□ -1.31
PCDHB1-201ENST00000306549 H0YL77 283 aa6.84□□□□□ -1.32
PCDHB1-201ENST00000306549 PIN1P1O15428 100 aa6.84□□□□□ -1.32
PCDHB1-201ENST00000306549 C1QL1O75973 258 aa6.84□□□□□ -1.32
PCDHB1-201ENST00000306549 ADAMTS20P59510 1910 aa6.84□□□□□ -1.32
PCDHB1-201ENST00000306549 IGKV1D-43A0A0B4J1Z2 117 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 LURAP1LQ8IV03 231 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 H3BMM0 161 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 TMEM249Q2WGJ8 235 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 BPESC1Q9GZL8 116 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 BUB1B-PAK6H3BSN5 160 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 C5orf64Q2M2E5 130 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 DUTP33316 252 aaKnown RBP6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 LAGE3Q14657 143 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 ACTL10Q5JWF8 245 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 C9orf139Q6ZV77 190 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 C22orf46C9J442 243 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 HIST1H4AP62805 103 aaKnown RBP6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 NIT1Q86X76 327 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 C15orf32Q32M92 178 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 FAM201AQ5SY85 155 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 FAM219BQ5XKK7 198 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms