RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MUC21A0A140T8X8 626 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 CELA3AP09093 270 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF415Q09FC8 603 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 MUC21Q5SSG8 566 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3OR16-13A0A075B7E8 117 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3-74A0A0B4J1X5 117 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 ROS1P08922 2347 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-201ENST00000302516 USF3Q68DE3 2245 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 PRSS22Q9GZN4 317 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 CRIM1Q9NZV1 1036 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
SF3B3-201ENST00000302516 RIF1Q5UIP0 2472 aaKnown RBP6.29□□□□□ -1.4
SF3B3-201ENST00000302516 GTSCR1Q86UQ5 136 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3-49A0A0A0MS15 119 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV2-26A0A0B4J1V2 119 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 MLNRO43193 412 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 C3orf79P0CE67 100 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
SF3B3-201ENST00000302516 Q86TA4 180 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 SH2D1AO60880 128 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 WNT2P09544 360 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 SPINK8P0C7L1 97 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 OR11H6Q8NGC7 330 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 PNRC2Q9NPJ4 139 aaKnown RBP6.28□□□□□ -1.4
SF3B3-201ENST00000302516 IGKV1D-8A0A087WSZ0 117 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 THBDP07204 575 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 OCIAD2Q56VL3 154 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ADAMTSL5Q6ZMM2 481 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 CST9LQ9H4G1 147 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ARHGAP21Q5T5U3 1957 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ADAMTS9Q9P2N4 1935 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 TRAV41A0A0B4J266 112 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 H0YJW9 148 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3-35A0A0C4DH35 117 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 SELLP14151 372 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ERCC8Q13216 396 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-201ENST00000302516 A0A087X0K7 114 aa6.27□□□□□ -1.4
SF3B3-201ENST00000302516 IGKV1-5P01602 117 aa6.27□□□□□ -1.4
SF3B3-201ENST00000302516 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.4
SF3B3-201ENST00000302516 OR10W1Q8NGF6 305 aa6.27□□□□□ -1.4
SF3B3-201ENST00000302516 IGKV1-27A0A075B6S5 117 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 H3BMM0 161 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 MPV17L2Q567V2 206 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 GGNQ86UU5 652 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 CSRP2Q16527 193 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 C9orf106Q8NAJ2 232 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 S4R3C0 116 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 NCOA6Q14686 2063 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-201ENST00000302516 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 VWC2LB2RUY7 222 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 INSP01308 110 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 PSG1P11464 419 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 LINC01560Q8TB33 94 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 JPT2Q9H910 190 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 CACNA1BQ00975 2339 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV1-18A0A0C4DH31 117 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 ZNF664Q8N3J9 261 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 TIMM23O14925 209 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-201ENST00000302516 NDUFB8O95169 186 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-201ENST00000302516 LINC00158P58513 81 aa6.27□□□□□ -1.41
SF3B3-201ENST00000302516 THSD7BQ9C0I4 1608 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 DMRTA2Q96SC8 542 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 hDV102S1A0JD36 115 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 F8WEM9 126 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM256Q8N2U0 113 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 ZNF319Q9P2F9 582 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 RFNGQ9Y644 331 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 PRSS46E5RG02 174 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 C3orf36Q3SXR2 165 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 ANAPC10Q9UM13 185 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV1-3A0A0C4DH29 117 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 NPIPB5A8MRT5 1133 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 EXOC3-AS1Q8N2X6 119 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 C1QTNF4Q9BXJ3 329 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV1-46P01743 117 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 CCL3L1P16619 93 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 RPL36AP83881 106 aaKnown RBP6.26□□□□□ -1.41
SF3B3-201ENST00000302516 UTF1Q5T230 341 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 RPL36ALQ969Q0 106 aaKnown RBP6.26□□□□□ -1.41
SF3B3-201ENST00000302516 SHANK2-AS3Q9BTD1 123 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 CDK2AP2O75956 126 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV2-70P01814 119 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 ADCYAP1P18509 176 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms