RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 M0R381 172 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 MFAP4P55083 255 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 AMMECR1LQ6DCA0 310 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 RNASEH2CQ8TDP1 164 aaKnown RBP10.76□□□□□ -0.69
CASC4-201ENST00000299957 E7EUB6 86 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 SLC25A48Q6ZT89 311 aaKnown RBP10.76□□□□□ -0.69
CASC4-201ENST00000299957 H3BUT2 72 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 KRTAP27-1Q3LI81 207 aa10.76□□□□□ -0.69
CASC4-201ENST00000299957 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 H7C2G1 150 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 TSPOP30536 169 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 FAM57AQ8TBR7 257 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 Q9UFV3 132 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 TCRAP04437 139 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 TYMSP04818 313 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 RNF125Q96EQ8 232 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 ZNF414Q96IQ9 312 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 CFAP47Q6ZTR5 3102 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 SCGB1C2P0DMR2 95 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 IGHV1-8P0DP01 117 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 C1orf229Q6ZS94 237 aaPredicted RBP10.75□□□□□ -0.69
CASC4-201ENST00000299957 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 DPM3Q9P2X0 92 aa10.75□□□□□ -0.69
CASC4-201ENST00000299957 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
CASC4-201ENST00000299957 RITA1Q96K30 269 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 LOC105371242A0A075B767 164 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 GOSR1O95249 250 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 TGFAP01135 160 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 FBLN7Q53RD9 439 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 LINC00173Q6ZV60 143 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
CASC4-201ENST00000299957 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 IGLL1P15814 213 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 APOBEC3AP31941 199 aaPredicted RBP10.74□□□□□ -0.69
CASC4-201ENST00000299957 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
CASC4-201ENST00000299957 ABCA12Q86UK0 2595 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 IGHV2-26A0A0B4J1V2 119 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 D6R8Y8 96 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 IGHG3P01860 377 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 PF4V1P10720 104 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 SRD5A1P18405 259 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 CFHR2P36980 270 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 A6NDN8 102 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 MEF2CQ06413 473 aaPredicted RBP10.73□□□□□ -0.69
CASC4-201ENST00000299957 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
CASC4-201ENST00000299957 TMPRSS3P57727 454 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 YPEL3P61236 119 aaPredicted RBP10.73□□□□□ -0.69
CASC4-201ENST00000299957 Q1RN00 199 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 DNLZQ5SXM8 178 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 TPTE2P1Q5T6R2 138 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 C22orf34Q6ZV56 151 aa10.73□□□□□ -0.69
CASC4-201ENST00000299957 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 K7ERU9 68 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 FAM215AQ9Y5M1 114 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 MTORP42345 2549 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 LOC107984156A0A0G2JMH3 177 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 IGLC2P0DOY2 106 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 IGLC3P0DOY3 106 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 ARL17AQ8IVW1 177 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 SLC25A2Q9BXI2 301 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 PRR20EP86478 221 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 PRR20CP86479 221 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 PRR20DP86480 221 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 PRR20BP86481 221 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 PRR20AP86496 221 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 FOXC2Q99958 501 aa10.72□□□□□ -0.69
CASC4-201ENST00000299957 KMT2EQ8IZD2 1858 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 IGHV1-3A0A0C4DH29 117 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 SPRY2O43597 315 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 PLP1P60201 277 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 NDPQ00604 133 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 PRSS57Q6UWY2 283 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 SIGLEC9Q9Y336 463 aa10.71□□□□□ -0.69
CASC4-201ENST00000299957 JMJD1CQ15652 2540 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms