RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SYNJ2BPP57105 145 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 MPDZO75970 2070 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 ICE1Q9Y2F5 2266 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 PPBPP02775 128 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 IGKV1-16P04430 117 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 COLCA2A8K830 154 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 CD5P06127 495 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 Q6P435 159 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 HSD52Q0P140 79 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 FBLN5Q9UBX5 448 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 THADAQ6YHU6 1953 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SIGMAR1Q99720 223 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 CSRP1P21291 193 aaKnown RBP11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 OCIAD2Q56VL3 154 aa11.05□□□□□ -0.64
CHRFAM7A-201ENST00000299847 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 ANK1P16157 1881 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TRBV7-1A0A0A6YYK4 115 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SAA4P35542 130 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SIGLEC9Q9Y336 463 aa11.04□□□□□ -0.64
CHRFAM7A-201ENST00000299847 CDK2AP2O75956 126 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TRGV9Q99603 122 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RHPN1-AS1Q9BWJ2 59 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 NMSQ5H8A3 153 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TNFRSF14Q92956 283 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 A0A1B0GUS0 222 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 OVOL3O00110 214 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 C6orf226Q5I0X4 101 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 MPZP25189 248 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RPRMLQ8N4K4 120 aa11.03□□□□□ -0.64
CHRFAM7A-201ENST00000299847 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TMEM238C9JI98 176 aa11.02□□□□□ -0.64
CHRFAM7A-201ENST00000299847 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TNFSF13O75888 250 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SSBP2P81877 361 aaPredicted RBP11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 C15orf62A8K5M9 175 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 B4DSR2 109 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE2EQ4V326 116 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ITGB1BP1O14713 200 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TMEM213A2RRL7 107 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 DEFB131AP59861 70 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TRAV26-2A0A0B4J265 109 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 E7EQL1 145 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 C2orf82Q6UX34 121 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ZNF562Q6V9R5 426 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 STPG4Q8N801 248 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 MDS2Q8NDY4 140 aa11.01□□□□□ -0.65
CHRFAM7A-201ENST00000299847 B3GALT5-AS1P59052 145 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ESPL1Q14674 2120 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 Q6ZRM9 215 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 CITED2Q99967 270 aaPredicted RBP11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 RASL10AQ92737 203 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 MS4A6AQ9H2W1 248 aa11□□□□□ -0.65
CHRFAM7A-201ENST00000299847 A0A096LPF7 62 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SPINK13Q1W4C9 94 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 LURAP1LQ8IV03 231 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 DSCR9P59020 149 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE1Q13065 139 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE4Q13068 117 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GAGE5Q13069 117 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 DOCK6Q96HP0 2047 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TRAV12-2A0A075B6T6 113 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 VCYO14598 125 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 CFHR2P36980 270 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 PRSS57Q6UWY2 283 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 KIR3DS1Q14943 382 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
CHRFAM7A-201ENST00000299847 FER1L5A0AVI2 2057 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms