RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 C11orf68Q9H3H3 251 aaKnown RBP9□□□□□ -0.97
PBRM1-201ENST00000296302 LTBRP36941 435 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 VOPP1Q96AW1 172 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 LINC00479Q96M42 142 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 LRRK1Q38SD2 2015 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 IGKV3D-20A0A0C4DH25 116 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 PDE6HQ13956 83 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 STPG4Q8N801 248 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 RNASE6Q93091 150 aaKnown RBP8.99□□□□□ -0.97
PBRM1-201ENST00000296302 V9GYV3 84 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 E9PLN8 166 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 NTN3O00634 580 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-201ENST00000296302 SLC25A20O43772 301 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 CD24P25063 80 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 C9orf139Q6ZV77 190 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 TMEM8BA6NDV4 472 aa8.99□□□□□ -0.97
PBRM1-201ENST00000296302 VDAC2P45880 294 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-201ENST00000296302 ARMS2P0C7Q2 107 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 RPL15P61313 204 aaKnown RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 NPFFR1Q9GZQ6 430 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 OOSP1A8MZH6 123 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 ETV2O00321 342 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 IGLL1P15814 213 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 ZCCHC24Q8N2G6 241 aaKnown RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 SPAG8Q99932 426 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 PEMTQ9UBM1 199 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 ARHGEF17Q96PE2 2063 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 COX6B1P14854 86 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 B3GALT5-AS1P59052 145 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-201ENST00000296302 COLCA1Q6ZS62 124 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 K7EP13 123 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 COX8AP10176 69 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 CYYR1Q96J86 154 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
PBRM1-201ENST00000296302 TRGV2A0A075B6R0 118 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 IGKV1D-17A0A075B6S4 117 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 K7EP34 96 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 LINC00205P59089 165 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 CSRP2Q16527 193 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SRSF8Q9BRL6 282 aaKnown RBP8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SMIM27A0A1W2PRY6 76 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 LGALS1P09382 135 aaKnown RBP8.97□□□□□ -0.97
PBRM1-201ENST00000296302 C15orf32Q32M92 178 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 Q8TAT8 98 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 CCL19Q99731 98 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SHANK2-AS3Q9BTD1 123 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 COA6Q5JTJ3 125 aaKnown RBP8.97□□□□□ -0.97
PBRM1-201ENST00000296302 TMEM86BQ8N661 226 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 C11orf52Q96A22 123 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 F8W1H4 67 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 SBF1O95248 1867 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 GAFA1Q96PS6 74 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 TMEM14BQ9NUH8 114 aa8.97□□□□□ -0.97
PBRM1-201ENST00000296302 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.97
PBRM1-201ENST00000296302 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.96□□□□□ -0.97
PBRM1-201ENST00000296302 TMEM178BH3BS89 294 aa8.96□□□□□ -0.97
PBRM1-201ENST00000296302 LMO1P25800 156 aa8.96□□□□□ -0.97
PBRM1-201ENST00000296302 FAM104BQ5XKR9 115 aa8.96□□□□□ -0.97
PBRM1-201ENST00000296302 CSTL1Q9H114 145 aa8.96□□□□□ -0.97
PBRM1-201ENST00000296302 LSM4Q9Y4Z0 139 aaKnown RBP8.96□□□□□ -0.97
PBRM1-201ENST00000296302 SLAQ13239 276 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 MLANAQ16655 118 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.98
PBRM1-201ENST00000296302 PRSS46E5RG02 174 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 WNT2P09544 360 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 ABCA7Q8IZY2 2146 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.98
PBRM1-201ENST00000296302 TRAV40A0A0B4J280 105 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 IGKV1-39P01597 117 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 IGKV1D-39P04432 117 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 C9JAW5 83 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 C5orf64Q2M2E5 130 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 C7orf69Q9H7B7 122 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 KLF12Q9Y4X4 402 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 LTBP1Q14766 1721 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 KIR2DL5BA0A0G2JN68 375 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 KIR2DL5BA0A0G2JPC4 375 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 MINOS1Q5TGZ0 78 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 KIR2DL5AQ8N109 375 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 TSSC4Q9Y5U2 329 aaPredicted RBP8.95□□□□□ -0.98
PBRM1-201ENST00000296302 MINOS1-NBL1R4GNA1 71 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 MED12Q93074 2177 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 HAX1O00165 279 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
PBRM1-201ENST00000296302 FAM168AQ92567 244 aa8.95□□□□□ -0.98
PBRM1-201ENST00000296302 ABHD17AQ96GS6 310 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms