RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 S100A7P31151 101 aa13.91□□□□□ -0.18
CXCL3-201ENST00000296026 DAD1P61803 113 aa13.91□□□□□ -0.18
CXCL3-201ENST00000296026 IGFL4Q6B9Z1 124 aa13.91□□□□□ -0.18
CXCL3-201ENST00000296026 ACOT7LQ6ZUV0 252 aa13.91□□□□□ -0.18
CXCL3-201ENST00000296026 DEDD2Q8WXF8 326 aa13.91□□□□□ -0.18
CXCL3-201ENST00000296026 DUSP14O95147 198 aaKnown RBP13.9□□□□□ -0.18
CXCL3-201ENST00000296026 CNN1P51911 297 aaKnown RBP13.9□□□□□ -0.18
CXCL3-201ENST00000296026 TRAV8-2A0A0B4J237 113 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 M0R2Z0 102 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 S100A5P33763 92 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 FGL1Q08830 312 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 SPINK13Q1W4C9 94 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 RNF212Q495C1 297 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 TMEM88Q6PEY1 159 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 Q6ZR54 194 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 TMEM144Q7Z5S9 345 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 OR11H7Q8NGC8 314 aa13.89□□□□□ -0.19
CXCL3-201ENST00000296026 SMCO3A2RU48 225 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 H3BRN7 92 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 CRXO43186 299 aaPredicted RBP13.88□□□□□ -0.19
CXCL3-201ENST00000296026 ADAP1O75689 374 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 INSP01308 110 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 PRM2P04554 102 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 IL5P05113 134 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 ID3Q02535 119 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 CYP2G1PQ6ZSU1 146 aa13.88□□□□□ -0.19
CXCL3-201ENST00000296026 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
CXCL3-201ENST00000296026 ZNF705GA8MUZ8 300 aaPredicted RBP13.87□□□□□ -0.19
CXCL3-201ENST00000296026 MED14OSP0DP75 135 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 RAP2BP61225 183 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
CXCL3-201ENST00000296026 CCDC190Q86UF4 302 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 PSENENQ9NZ42 101 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 HIGD1AQ9Y241 93 aa13.87□□□□□ -0.19
CXCL3-201ENST00000296026 C9orf170A2RU37 121 aa13.86□□□□□ -0.19
CXCL3-201ENST00000296026 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
CXCL3-201ENST00000296026 BAP18Q8IXM2 172 aa13.86□□□□□ -0.19
CXCL3-201ENST00000296026 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
CXCL3-201ENST00000296026 FAT2Q9NYQ8 4349 aa13.86□□□□□ -0.19
CXCL3-201ENST00000296026 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 HYPMO75409 117 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 OR5G3P0C626 314 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 LINC00869P0C866 280 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
CXCL3-201ENST00000296026 B2MP61769 119 aa13.85□□□□□ -0.19
CXCL3-201ENST00000296026 DNAH17Q9UFH2 4485 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 TRAV12-2A0A075B6T6 113 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 BOLA2-SMG1P6H3BVE0 249 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 SSSCA1O60232 199 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 SOHLH1Q5JUK2 328 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 C15orf53Q8NAA6 179 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 UHRF2Q96PU4 802 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 DNAH2Q9P225 4427 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 NACAE9PAV3 2078 aa13.84□□□□□ -0.19
CXCL3-201ENST00000296026 PCLOQ9Y6V0 5065 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 CCNKO75909 580 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 DEFB130BP0DP73 79 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 DEFB130AP0DP74 79 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 TSPOP30536 169 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 PLP1P60201 277 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 RRAS2P62070 204 aaPredicted RBP13.83□□□□□ -0.2
CXCL3-201ENST00000296026 SELENOTP62341 195 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.2
CXCL3-201ENST00000296026 SMIM8Q96KF7 97 aa13.83□□□□□ -0.2
CXCL3-201ENST00000296026 NDUFB6O95139 128 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 CXCL3P19876 107 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 AZU1P20160 251 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 INPP1P49441 399 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 RHOBP62745 196 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 DLK1P80370 383 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 OR8A1Q8NGG7 326 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 SRRQ9GZT4 340 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 FLVCR2Q9UPI3 526 aa13.82□□□□□ -0.2
CXCL3-201ENST00000296026 A0A087X0K7 114 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 PLAC8L1A1L4L8 177 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 NAP1L6A6NFF2 107 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 FCN2Q15485 313 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 PSG3Q16557 428 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 SPANXN2Q5MJ10 180 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 C1orf134Q5TEV5 83 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 LRRC20Q8TCA0 184 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 LINC01587Q99440 93 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 ATG101Q9BSB4 218 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 ARL6Q9H0F7 186 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 PPP1R14DQ9NXH3 145 aa13.81□□□□□ -0.2
CXCL3-201ENST00000296026 OR4E1P0C645 316 aa13.8□□□□□ -0.2
CXCL3-201ENST00000296026 PRB4P10163 310 aaPredicted RBP13.8□□□□□ -0.2
CXCL3-201ENST00000296026 FAM3BP58499 235 aaPredicted RBP13.8□□□□□ -0.2
CXCL3-201ENST00000296026 BAK1Q16611 211 aa13.8□□□□□ -0.2
CXCL3-201ENST00000296026 TMEM14EPQ6UXP3 125 aa13.8□□□□□ -0.2
CXCL3-201ENST00000296026 PATE2Q6UY27 113 aa13.8□□□□□ -0.2
CXCL3-201ENST00000296026 S100A7AQ86SG5 101 aa13.8□□□□□ -0.2
CXCL3-201ENST00000296026 F5H768 121 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 SCGB1D2O95969 90 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms