RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
SSRP1-202ENST00000293880 ZDBF2Q9HCK1 2354 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 ID3Q02535 119 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
SSRP1-202ENST00000293880 AGMATQ9BSE5 352 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 SNHG12Q9BXW3 62 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 SRRM4A7MD48 611 aaKnown RBP13.21□□□□□ -0.29
SSRP1-202ENST00000293880 SUPT4H1P63272 117 aaKnown RBP13.21□□□□□ -0.29
SSRP1-202ENST00000293880 HAMPP81172 84 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 MLANAQ16655 118 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 LINC01551Q86U37 167 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 OVOL1O14753 267 aa13.21□□□□□ -0.29
SSRP1-202ENST00000293880 ZNF329Q86UD4 541 aa13.21□□□□□ -0.3
SSRP1-202ENST00000293880 AMN1Q8IY45 258 aa13.21□□□□□ -0.3
SSRP1-202ENST00000293880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.21□□□□□ -0.3
SSRP1-202ENST00000293880 SMIM20Q8N5G0 67 aa13.21□□□□□ -0.3
SSRP1-202ENST00000293880 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 SYS1-DBNDD2H3BUS1 97 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 MPZP25189 248 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 ZNRD1Q9P1U0 126 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 IGHV1-3A0A0C4DH29 117 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 RP1P56715 2156 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 NTF4P34130 210 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
SSRP1-202ENST00000293880 SPTA1P02549 2419 aa13.19□□□□□ -0.3
SSRP1-202ENST00000293880 WDR83OSQ9Y284 106 aa13.19□□□□□ -0.3
SSRP1-202ENST00000293880 PPBPP02775 128 aa13.19□□□□□ -0.3
SSRP1-202ENST00000293880 CD5LO43866 347 aa13.19□□□□□ -0.3
SSRP1-202ENST00000293880 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
SSRP1-202ENST00000293880 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 PMVKQ15126 192 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 HOXD3P31249 432 aaPredicted RBP13.18□□□□□ -0.3
SSRP1-202ENST00000293880 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 LINC00473A8K010 186 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 LEPROTO15243 131 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
SSRP1-202ENST00000293880 PSPNO60542 156 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 NRN1LQ496H8 165 aa13.18□□□□□ -0.3
SSRP1-202ENST00000293880 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 A8MWP6 167 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 TCTEX1D4Q5JR98 221 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 C3orf56Q8N813 242 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 SEC16AO15027 2179 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 TRAV26-2A0A0B4J265 109 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 ADCYAP1P18509 176 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 DEFB121Q5J5C9 76 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
SSRP1-202ENST00000293880 FLVCR1-AS1Q8TAF5 88 aa13.17□□□□□ -0.3
SSRP1-202ENST00000293880 RNASE6Q93091 150 aaKnown RBP13.17□□□□□ -0.3
SSRP1-202ENST00000293880 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 IGHV1-8P0DP01 117 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
SSRP1-202ENST00000293880 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 TET1Q8NFU7 2136 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 PSCAO43653 123 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 EFNA2O43921 213 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 K7ERJ3 54 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
SSRP1-202ENST00000293880 Q6ZVH6 145 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 LOC285556D6RIA3 1793 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 A0A087WX48 190 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 F8WEM9 126 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 SPTBP11277 2137 aa13.16□□□□□ -0.3
SSRP1-202ENST00000293880 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 RASL10AQ92737 203 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 VWCEQ96DN2 955 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 KNCNA6PVL3 124 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 TMEM242Q9NWH2 141 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 H0YJW9 148 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 K7EP13 123 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 DKK1O94907 266 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 LY6HO94772 140 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 CRYGSP22914 178 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 SLC25A48Q6ZT89 311 aaKnown RBP13.15□□□□□ -0.3
SSRP1-202ENST00000293880 PLEKHB2Q96CS7 222 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 CACNA1DQ01668 2161 aa13.15□□□□□ -0.3
SSRP1-202ENST00000293880 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 A0A0G2JRQ6 117 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 GAS1P54826 345 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 DTX2Q86UW9 622 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 FAM90A9PA6NNJ1 464 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
SSRP1-202ENST00000293880 MSRB2Q9Y3D2 182 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 DOCK4Q8N1I0 1966 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 CFHR2P36980 270 aa13.14□□□□□ -0.31
SSRP1-202ENST00000293880 GGNQ86UU5 652 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 SOCS3O14543 225 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 MST1P26927 711 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms