RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TMEM14CQ9P0S9 112 aa11.92□□□□□ -0.5
CCDC116-201ENST00000292779 CENPEQ02224 2701 aa11.92□□□□□ -0.5
CCDC116-201ENST00000292779 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 A6NNC1 897 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 FBLN7Q53RD9 439 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 FAM19A2Q8N3H0 131 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 Q8N976 141 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 SNHG12Q9BXW3 62 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 PRSS22Q9GZN4 317 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 TRAV8-1A0A0A6YYK1 113 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 C19orf71A6NCJ1 209 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
CCDC116-201ENST00000292779 VAMP8Q9BV40 100 aa11.91□□□□□ -0.5
CCDC116-201ENST00000292779 LOC105371242A0A075B767 164 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 TOX4O94842 621 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 P01737 135 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 CEACAM3P40198 252 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 PRR31Q5SQ13 230 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 ATP5L2Q7Z4Y8 100 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 NIT1Q86X76 327 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 HES1Q14469 280 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 KLF17Q5JT82 389 aaPredicted RBP11.9□□□□□ -0.5
CCDC116-201ENST00000292779 Q86TA4 180 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 NPBQ8NG41 125 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
CCDC116-201ENST00000292779 RBM14Q96PK6 669 aaKnown RBP11.9□□□□□ -0.5
CCDC116-201ENST00000292779 A8MWL6 223 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 NDUFA3O95167 84 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 NTF3P20783 257 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
CCDC116-201ENST00000292779 GOLT1AQ6ZVE7 132 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 ALKBH7Q9BT30 221 aaPredicted RBP11.89□□□□□ -0.51
CCDC116-201ENST00000292779 S4R3C0 116 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 FAM208BQ5VWN6 2430 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 M0R1W7 72 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 OR2J3O76001 311 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 CT83Q5H943 113 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
CCDC116-201ENST00000292779 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
CCDC116-201ENST00000292779 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
CCDC116-201ENST00000292779 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
CCDC116-201ENST00000292779 PRTN3P24158 256 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
CCDC116-201ENST00000292779 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 ZNF491Q8N8L2 437 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
CCDC116-201ENST00000292779 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 A0A1W2PPR1 153 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 H3BRN7 92 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 M0R143 59 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 C3orf79P0CE67 100 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 HBBP68871 147 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 MIEN1Q9BRT3 115 aa11.88□□□□□ -0.51
CCDC116-201ENST00000292779 MAP1AP78559 2803 aaPredicted RBP11.88□□□□□ -0.51
CCDC116-201ENST00000292779 TRBV19A0A075B6N1 114 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 IL4P05112 153 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 RAB4AP20338 218 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 RNF125Q96EQ8 232 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 WNK2Q9Y3S1 2297 aa11.87□□□□□ -0.51
CCDC116-201ENST00000292779 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
CCDC116-201ENST00000292779 IGLC2P0DOY2 106 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
CCDC116-201ENST00000292779 COL8A1P27658 744 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC116-201ENST00000292779 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
CCDC116-201ENST00000292779 DYNAPQ8N1N2 210 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 OR4F17Q8NGA8 305 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
CCDC116-201ENST00000292779 NPIPB6E9PJ23 425 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 HSBP1O75506 76 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 SSTP61278 116 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 NUTF2P61970 127 aaKnown RBP11.85□□□□□ -0.51
CCDC116-201ENST00000292779 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
CCDC116-201ENST00000292779 VMO1Q7Z5L0 202 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
CCDC116-201ENST00000292779 OR4B1Q8NGF8 309 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 GNG7O60262 68 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 NDUFS7O75251 213 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 HLA-DRB1P01911 266 aa11.85□□□□□ -0.51
CCDC116-201ENST00000292779 FCGR2BP31994 310 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms