RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PFDN5Q99471 154 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 ASCL2Q99929 193 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 SMIM3Q9BZL3 60 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 KCNIP2Q9NS61 270 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 RPL7P18124 248 aaKnown RBP19.93■□□□□ 0.78
SSU72-201ENST00000291386 DEFB131AP59861 70 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 HAGHQ16775 308 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 SAMD13Q5VXD3 122 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 C10orf113Q5VZT2 155 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 LEMD1Q68G75 181 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 APRG1Q8IVJ8 170 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 WFDC1Q9HC57 220 aa19.93■□□□□ 0.78
SSU72-201ENST00000291386 LOC102724200A0A096LPH7 203 aaPredicted RBP19.92■□□□□ 0.78
SSU72-201ENST00000291386 C17orf112F2Z3M2 114 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 SOCS3O14543 225 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 IFNA5P01569 189 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 MEOX2P50222 304 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 C17orf77Q96MU5 243 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 TNFSF18Q9UNG2 199 aa19.92■□□□□ 0.78
SSU72-201ENST00000291386 ZNF688P0C7X2 276 aa19.91■□□□□ 0.78
SSU72-201ENST00000291386 SNRPD3P62318 126 aaKnown RBP19.91■□□□□ 0.78
SSU72-201ENST00000291386 ZNF709Q8N972 641 aa19.91■□□□□ 0.78
SSU72-201ENST00000291386 GATAD1Q8WUU5 269 aa19.91■□□□□ 0.78
SSU72-201ENST00000291386 TM2D3Q9BRN9 247 aa19.91■□□□□ 0.78
SSU72-201ENST00000291386 ZNF124Q15973 351 aa19.9■□□□□ 0.78
SSU72-201ENST00000291386 INO80EQ8NBZ0 244 aaPredicted RBP19.9■□□□□ 0.78
SSU72-201ENST00000291386 SCGB1C1Q8TD33 95 aa19.9■□□□□ 0.78
SSU72-201ENST00000291386 RSG1Q9BU20 258 aa19.9■□□□□ 0.78
SSU72-201ENST00000291386 FXYD6-FXYD2A0A087WZ82 144 aa19.89■□□□□ 0.77
SSU72-201ENST00000291386 RNF222A6NCQ9 220 aa19.89■□□□□ 0.77
SSU72-201ENST00000291386 MRPS12O15235 138 aaKnown RBP19.89■□□□□ 0.77
SSU72-201ENST00000291386 A0A087X0K7 114 aa19.88■□□□□ 0.77
SSU72-201ENST00000291386 ID1P41134 155 aa19.88■□□□□ 0.77
SSU72-201ENST00000291386 PSMB3P49720 205 aa19.88■□□□□ 0.77
SSU72-201ENST00000291386 ZNF266Q14584 549 aa19.88■□□□□ 0.77
SSU72-201ENST00000291386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.88■□□□□ 0.77
SSU72-201ENST00000291386 ISLRO14498 428 aa19.87■□□□□ 0.77
SSU72-201ENST00000291386 PSMG4Q5JS54 123 aa19.87■□□□□ 0.77
SSU72-201ENST00000291386 MORN5Q5VZ52 161 aa19.87■□□□□ 0.77
SSU72-201ENST00000291386 COL7A1Q02388 2944 aa19.87■□□□□ 0.77
SSU72-201ENST00000291386 KIR2DL5BA0A0G2JN68 375 aa19.86■□□□□ 0.77
SSU72-201ENST00000291386 KIR2DL5BA0A0G2JPC4 375 aa19.86■□□□□ 0.77
SSU72-201ENST00000291386 ATF4P18848 351 aaPredicted RBP19.86■□□□□ 0.77
SSU72-201ENST00000291386 BPIFA4PQ86YQ2 179 aa19.86■□□□□ 0.77
SSU72-201ENST00000291386 KIR2DL5AQ8N109 375 aa19.86■□□□□ 0.77
SSU72-201ENST00000291386 KIR2DL5BQ8NHK3 375 aa19.86■□□□□ 0.77
SSU72-201ENST00000291386 SPATA25Q9BR10 227 aa19.85■□□□□ 0.77
SSU72-201ENST00000291386 ZMAT4Q9H898 229 aa19.85■□□□□ 0.77
SSU72-201ENST00000291386 TIMM9Q9Y5J7 89 aa19.85■□□□□ 0.77
SSU72-201ENST00000291386 APOC4P55056 127 aa19.84■□□□□ 0.77
SSU72-201ENST00000291386 GCSAMLQ5JQS6 135 aa19.84■□□□□ 0.77
SSU72-201ENST00000291386 HUWE1Q7Z6Z7 4374 aaKnown RBP19.84■□□□□ 0.77
SSU72-201ENST00000291386 SMLR1H3BR10 107 aa19.83■□□□□ 0.77
SSU72-201ENST00000291386 CXCL2P19875 107 aa19.83■□□□□ 0.77
SSU72-201ENST00000291386 C16orf92Q96LL3 132 aa19.83■□□□□ 0.77
SSU72-201ENST00000291386 UBE2CO00762 179 aa19.82■□□□□ 0.76
SSU72-201ENST00000291386 TRAV5A0A0B4J249 113 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 ARPC5O15511 151 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 RPL35AP18077 110 aaKnown RBP19.81■□□□□ 0.76
SSU72-201ENST00000291386 FFAR4Q5NUL3 377 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 FAM78BQ5VT40 261 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 STHQ8IWL8 128 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 MRPL32Q9BYC8 188 aaKnown RBP19.81■□□□□ 0.76
SSU72-201ENST00000291386 TMEM14CQ9P0S9 112 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 U3KQK5 164 aa19.81■□□□□ 0.76
SSU72-201ENST00000291386 TRAV8-2A0A0B4J237 113 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 HMSDA8MTL9 139 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 IGLC2P0DOY2 106 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 TRPT1Q86TN4 253 aaKnown RBP19.8■□□□□ 0.76
SSU72-201ENST00000291386 LINC00052Q96N35 136 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 MFFQ9GZY8 342 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 HRH4Q9H3N8 390 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 AGRNO00468 2067 aa19.8■□□□□ 0.76
SSU72-201ENST00000291386 KNCNA6PVL3 124 aa19.79■□□□□ 0.76
SSU72-201ENST00000291386 TAAR5O14804 337 aa19.79■□□□□ 0.76
SSU72-201ENST00000291386 LCN15Q6UWW0 184 aa19.79■□□□□ 0.76
SSU72-201ENST00000291386 ST6GAL2Q96JF0 529 aa19.79■□□□□ 0.76
SSU72-201ENST00000291386 PSMG3Q9BT73 122 aaPredicted RBP19.79■□□□□ 0.76
SSU72-201ENST00000291386 CSTL1Q9H114 145 aa19.79■□□□□ 0.76
SSU72-201ENST00000291386 ZNF345Q14585 488 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 ACTL10Q5JWF8 245 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 FOXI2Q6ZQN5 318 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 Q6ZWC4 215 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 OR11H4Q8NGC9 324 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 OR2G3Q8NGZ4 309 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 C20orf173Q96LM9 149 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 RCHY1Q96PM5 261 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 SAV1Q9H4B6 383 aaPredicted RBP19.78■□□□□ 0.76
SSU72-201ENST00000291386 RPRMQ9NS64 109 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 FUT9Q9Y231 359 aa19.78■□□□□ 0.76
SSU72-201ENST00000291386 HLA-DRB4P13762 266 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 GUK1Q16774 197 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 SPATA31B1PQ5VZV4 182 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 HSD17B11Q8NBQ5 300 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 FAM167A-AS1Q96KT0 104 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 SLC50A1Q9BRV3 221 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 SLC25A2Q9BXI2 301 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 HLA-DRB4X5D2U9 266 aa19.77■□□□□ 0.76
SSU72-201ENST00000291386 BORCS7-ASMTA0A0B4J1R7 106 aa19.76■□□□□ 0.75
SSU72-201ENST00000291386 H3BMM0 161 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms