RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 B3GALT5-AS1P59052 145 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 LY6EQ16553 131 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 ZC2HC1BQ5TFG8 222 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 NEGR1Q7Z3B1 354 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 BMPERQ8N8U9 685 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 DEFB125Q8N687 156 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 CEP250Q9BV73 2442 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 TRAV2A0A0B4J234 112 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 GVINP1Q7Z2Y8 2422 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 OR11H6Q8NGC7 330 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 JMJD8Q96S16 334 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
PCDHA13-201ENST00000289272 LGALS1P09382 135 aaKnown RBP14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 C2orf82Q6UX34 121 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 MDS2Q8NDY4 140 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 SCRT1Q9BWW7 348 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 IGHV1-18A0A0C4DH31 117 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 TMEM8BA6NDV4 472 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 THBDP07204 575 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 ICE1Q9Y2F5 2266 aa14.3□□□□□ -0.12
PCDHA13-201ENST00000289272 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
PCDHA13-201ENST00000289272 SLAQ13239 276 aa14.29□□□□□ -0.12
PCDHA13-201ENST00000289272 PRSS46E5RG02 174 aa14.29□□□□□ -0.12
PCDHA13-201ENST00000289272 TRGV3P03979 118 aa14.29□□□□□ -0.12
PCDHA13-201ENST00000289272 TGFAP01135 160 aa14.29□□□□□ -0.12
PCDHA13-201ENST00000289272 DPH3P1Q9H4G8 78 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 SH2D1AO60880 128 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 DUSP14O95147 198 aaKnown RBP14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 RNASE2P10153 161 aaKnown RBP14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 NAA38Q9BRA0 125 aaKnown RBP14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 TFF1P04155 84 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 TMEM155Q4W5P6 130 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 IGKV1D-33P01593 117 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 IGKV1-33P01594 117 aa14.28□□□□□ -0.12
PCDHA13-201ENST00000289272 CSTL1Q9H114 145 aa14.27□□□□□ -0.12
PCDHA13-201ENST00000289272 C7orf69Q9H7B7 122 aa14.27□□□□□ -0.12
PCDHA13-201ENST00000289272 TRGV11A0A075B6L2 103 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 TNFRSF6BO95407 300 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 PRTN3P24158 256 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 C20orf204Q6ZNR8 217 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 DUX5Q96PT3 197 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 IGHG3P01860 377 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 TMEM158Q8WZ71 300 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 LINC00473A8K010 186 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 VCYO14598 125 aa14.27□□□□□ -0.13
PCDHA13-201ENST00000289272 VWC2Q2TAL6 325 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 FAM104BQ5XKR9 115 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 COLCA1Q6ZS62 124 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 GGTLC3B5MD39 225 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 EVI2AP22794 236 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 ZNF581Q9P0T4 197 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 PSPNO60542 156 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 PF4P02776 101 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 LMO1P25800 156 aa14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 CNOT1A5YKK6 2376 aaKnown RBP14.26□□□□□ -0.13
PCDHA13-201ENST00000289272 MBD3L4A6NDZ8 208 aaPredicted RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 MBD3L3A6NE82 208 aaPredicted RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 MBD3L5A6NJ08 208 aaPredicted RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 OOSP1A8MZH6 123 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 ZCCHC24Q8N2G6 241 aaKnown RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 Q8N8P6 123 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 MBD3L2Q8NHZ7 208 aaPredicted RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 Q6ZS92 163 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 ZNF524Q96C55 264 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 HEATR5AQ86XA9 2040 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 TMEM14BQ9NUH8 114 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 CCL3L1P16619 93 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 RNASE4P34096 147 aaKnown RBP14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 MSRB2Q9Y3D2 182 aa14.25□□□□□ -0.13
PCDHA13-201ENST00000289272 IGKV1-6A0A0C4DH72 117 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 A0A1B0GUS0 222 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 IGLV3-1P01715 115 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 NUP37Q8NFH4 326 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 PHF3Q92576 2039 aaKnown RBP14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 WISP1O95388 367 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 ZNF138P52744 262 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 TMEM141Q96I45 108 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 NOTCH4Q99466 2003 aa14.24□□□□□ -0.13
PCDHA13-201ENST00000289272 MPDZO75970 2070 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 PMS2P5A8MQ11 134 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 INAFM2P0DMQ5 153 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 IFITM1P13164 125 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 C9orf139Q6ZV77 190 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 CCL25O15444 150 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 IGHV1-46P01743 117 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 CD28P10747 220 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 AZU1P20160 251 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 CEND1Q8N111 149 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 LINC00477Q96M19 166 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 TMEM14CQ9P0S9 112 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms