RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 H7C2G1 150 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 ATP6V1FQ16864 119 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 TMEM241Q24JQ0 296 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 C5orf56Q8N8D9 126 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 OR1N2Q8NGR9 330 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 RITA1Q96K30 269 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 COL6A5A8TX70 2615 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 A0A087WX48 190 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 HMSDA8MTL9 139 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 P2RY1P47900 373 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 FXYD7P58549 80 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 SMIM8Q96KF7 97 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 KLK9Q9UKQ9 250 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF253O75346 499 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 ZP3P21754 424 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 GCSHP23434 173 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 Q6ZRM9 215 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 OR8A1Q8NGG7 326 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF48Q96MX3 618 aaPredicted RBP6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF256Q9Y2P7 627 aaPredicted RBP6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 TMEM189A5PLL7 270 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 MPTX1A8MV57 137 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 SRSF9Q13242 221 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 Q8N9W7 124 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 SYT8Q8NBV8 401 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 TEX50A0A1B0GTY4 177 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 MYOD1P15172 320 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF345Q14585 488 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAV14DV4A0A0A6YYC5 116 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 GRIFINA4D1Z8 144 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 BRI3O95415 125 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 CA2P00918 260 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 EWSR1Q01844 656 aaKnown RBP eCLIP6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 FBLN7Q53RD9 439 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 LEMD1Q68G75 181 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 PVRIGQ6DKI7 326 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF562Q6V9R5 426 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 OR13C6PQ8NH95 151 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 YTHDF2Q9Y5A9 579 aaKnown RBP6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 CNTFRP26992 372 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 BSXQ3C1V8 233 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 BCL6BQ8N143 479 aaPredicted RBP6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 STPG2Q8N412 459 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 OR10G8Q8NGN5 311 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 VGLL1Q99990 258 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 RBKSQ9H477 322 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 DNAJC4Q9NNZ3 241 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 LYRM2Q9NU23 88 aaPredicted RBP6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAPPC1Q9Y5R8 145 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 TCF21O43680 179 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 PSMB2P49721 201 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 Q5BKY6 102 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 Q8N2B8 174 aa6.67□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAV3A0A0B4J244 114 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 NDPQ00604 133 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 NPIPB5A8MRT5 1133 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 RAB5CP51148 216 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 RIGQ13278 110 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF343Q6P1L6 599 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 ASH1LQ9NR48 2969 aaKnown RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 MDKP21741 143 aaPredicted RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TAS2R60P59551 318 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 AQP10Q96PS8 301 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TNFSF18Q9UNG2 199 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TACC2O95359 2948 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAV30A0A087WSZ9 112 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAV41A0A0B4J266 112 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 PPP1R17O96001 155 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 HIST1H1BP16401 226 aaKnown RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 ATP6V0CP27449 155 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 CKS2P33552 79 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TMEM252Q8N6L7 170 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 GPR82Q96P67 336 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 RNF126Q9BV68 326 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
PTPDC1-201ENST00000288976 TEX22C9J3V5 150 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 IGF1P05019 195 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 CD7P09564 240 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 CRISP2P16562 243 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 PPIFP30405 207 aaKnown RBP6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 HILS1P60008 231 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 COMMD1Q8N668 190 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 CHCHD5Q9BSY4 110 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 H3BUA1 57 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 BCL2L11O43521 198 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 IGHV4-59P01825 116 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 IGHG2P01859 326 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 RPL29P47914 159 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms