RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CSN3P07498 182 aa10.52□□□□□ -0.73
SLC28A1-201ENST00000286749 C21orf62-AS1Q17RA5 79 aa10.52□□□□□ -0.73
SLC28A1-201ENST00000286749 MPV17L2Q567V2 206 aa10.52□□□□□ -0.73
SLC28A1-201ENST00000286749 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.73
SLC28A1-201ENST00000286749 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 LIPFP07098 398 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 ADGRG4Q8IZF6 3080 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 HTR1DP28221 377 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 PAX2Q02962 417 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 RASL11BQ9BPW5 248 aa10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
SLC28A1-201ENST00000286749 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 OVOL3O00110 214 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 PRRG2O14669 202 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 IGLV1-47P01700 117 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 ERASQ7Z444 233 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 SRSF12Q8WXF0 261 aaKnown RBP10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 MAP1LC3CQ9BXW4 147 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 I3L2K1 104 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 FBLN7Q53RD9 439 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 C16orf54Q6UWD8 224 aa10.5□□□□□ -0.73
SLC28A1-201ENST00000286749 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 HSBP1L1C9JCN9 74 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 COX7A1P24310 79 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 PMCHL2Q9BQD1 86 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 E7EQL1 145 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 NUDT3O95989 172 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 IGKV1-17P01599 117 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 RBPJQ06330 500 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 PLGLAQ15195 96 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 TNFRSF14Q92956 283 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 NGBQ9NPG2 151 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 POLEQ07864 2286 aa10.49□□□□□ -0.73
SLC28A1-201ENST00000286749 ZNF292O60281 2723 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 TACC2O95359 2948 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 LOC105371242A0A075B767 164 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 RALYQ9UKM9 306 aaKnown RBP10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 TPRP12270 2363 aaKnown RBP10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 LYNX1G3V0Z9 82 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 LYNX1P0DP58 116 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 HSPB8Q9UJY1 196 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 ATMQ13315 3056 aa10.48□□□□□ -0.73
SLC28A1-201ENST00000286749 APC2O95996 2303 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 KLK10O43240 276 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 PCP4P48539 62 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 VAMP3Q15836 100 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 BVES-AS1Q5T3Y7 98 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 NEU4Q8WWR8 484 aaPredicted RBP10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 TPPP3Q9BW30 176 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 PIEZO2Q9H5I5 2752 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 ACACAQ13085 2346 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 RIGQ13278 110 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 BPIFA4PQ86YQ2 179 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 TMEM75Q8N9X5 138 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 RPEQ96AT9 228 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 SHANK2-AS3Q9BTD1 123 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 PSG8Q9UQ74 426 aa10.47□□□□□ -0.73
SLC28A1-201ENST00000286749 GVINP1Q7Z2Y8 2422 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 CNIH1O95406 144 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 HLA-DRB1P01911 266 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 OR4C5Q8NGB2 326 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 JKAMPQ9P055 326 aa10.46□□□□□ -0.73
SLC28A1-201ENST00000286749 H3BRN7 92 aa10.46□□□□□ -0.74
SLC28A1-201ENST00000286749 K7EIM0 57 aa10.46□□□□□ -0.74
SLC28A1-201ENST00000286749 TAX1BP3O14907 124 aa10.46□□□□□ -0.74
SLC28A1-201ENST00000286749 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.74
SLC28A1-201ENST00000286749 CRIP1P50238 77 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 RBX1P62877 108 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 S4R3C0 116 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 K7EQM0 130 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 M0R3E3 92 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 PSG3Q16557 428 aa10.45□□□□□ -0.74
SLC28A1-201ENST00000286749 GFRALQ6UXV0 394 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms