RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 UTF1Q5T230 341 aa11.59□□□□□ -0.55
TMEM47-201ENST00000275954 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
TMEM47-201ENST00000275954 NBEAQ8NFP9 2946 aa11.59□□□□□ -0.55
TMEM47-201ENST00000275954 LRP4O75096 1905 aa11.58□□□□□ -0.55
TMEM47-201ENST00000275954 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 IFITM10A6NMD0 228 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
TMEM47-201ENST00000275954 BMI1P35226 326 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 PDLIM4P50479 330 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 RPL15P61313 204 aaKnown RBP11.58□□□□□ -0.56
TMEM47-201ENST00000275954 REC114Q7Z4M0 266 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 IZUMO1RA6ND01 250 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 NMUP48645 174 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 CX3CL1P78423 397 aa11.58□□□□□ -0.56
TMEM47-201ENST00000275954 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 FOSL1P15407 271 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 DLX6P56179 175 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 RHOGP84095 191 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 ATP5G2Q06055 141 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 FOXL1Q12952 345 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 TMEM155Q4W5P6 130 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 C18orf15Q96N68 181 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 PMCHL1Q16048 86 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 C21orf62-AS1Q17RA5 79 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 OR4C5Q8NGB2 326 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 AP5S1Q9NUS5 200 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 CHD3Q12873 2000 aaKnown RBP11.57□□□□□ -0.56
TMEM47-201ENST00000275954 CEACAM4O75871 244 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 ADORA2A-AS1P86434 159 aa11.57□□□□□ -0.56
TMEM47-201ENST00000275954 TM4SF20Q53R12 229 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
TMEM47-201ENST00000275954 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 C8orf46Q8TAG6 207 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 RPLP1P05386 114 aaKnown RBP11.56□□□□□ -0.56
TMEM47-201ENST00000275954 TPTE2P1Q5T6R2 138 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 OR5AN1Q8NGI8 311 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
TMEM47-201ENST00000275954 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 KALRNO60229 2985 aa11.56□□□□□ -0.56
TMEM47-201ENST00000275954 CDSNQ15517 529 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 VMO1Q7Z5L0 202 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 LAMA5O15230 3695 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 PROP1O75360 226 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 F11RQ9Y624 299 aaKnown RBP11.55□□□□□ -0.56
TMEM47-201ENST00000275954 MGAM2Q2M2H8 2515 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 TMEM8BA6NDV4 472 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 SIAH2O43255 324 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
TMEM47-201ENST00000275954 CDC42EP3Q9UKI2 254 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 PSG9Q00887 426 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 TNFRSF14Q92956 283 aa11.55□□□□□ -0.56
TMEM47-201ENST00000275954 C19orf84I3L1E1 186 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
TMEM47-201ENST00000275954 HIST1H1AQ02539 215 aaPredicted RBP11.54□□□□□ -0.56
TMEM47-201ENST00000275954 LCN12Q6JVE5 192 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 EEF1AKMT3Q96AZ1 226 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 UQCR10Q9UDW1 63 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 TACC2O95359 2948 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 SSBP2P81877 361 aaPredicted RBP11.54□□□□□ -0.56
TMEM47-201ENST00000275954 Q8TCH9 128 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 FNDC4Q9H6D8 234 aaPredicted RBP11.54□□□□□ -0.56
TMEM47-201ENST00000275954 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
TMEM47-201ENST00000275954 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
TMEM47-201ENST00000275954 A0A1B0GWJ7 208 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 C9JCJ5 164 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 Q8TAT8 98 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
TMEM47-201ENST00000275954 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
TMEM47-201ENST00000275954 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 IGSF10Q6WRI0 2623 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 M0R381 172 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 TCRAP04437 139 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 ZNF138P52744 262 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 CYB5R2Q6BCY4 276 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 VPS25Q9BRG1 176 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 ITPR3Q14573 2671 aa11.53□□□□□ -0.56
TMEM47-201ENST00000275954 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.56
TMEM47-201ENST00000275954 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.56
TMEM47-201ENST00000275954 A0A1W2PRX2 142 aa11.52□□□□□ -0.57
TMEM47-201ENST00000275954 GPX1P07203 203 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms