RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 CFHR2P36980 270 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 IGKV1D-16P01601 117 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 A0A1W2PR77 199 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 EXOC3-AS1Q8N2X6 119 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
UBR3-201ENST00000272793 CTSBP07858 339 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
UBR3-201ENST00000272793 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 ARID2Q68CP9 1835 aa13.12□□□□□ -0.31
UBR3-201ENST00000272793 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
UBR3-201ENST00000272793 AZU1P20160 251 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 ZIC1Q15915 447 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 SPANXCQ9NY87 97 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 OVOL1O14753 267 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 BSPH1Q075Z2 132 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 NBR2O15453 112 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BKO60814 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BJP06899 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BOP23527 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BBP33778 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BDP58876 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BCP62807 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST2H2BEQ16778 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.11□□□□□ -0.31
UBR3-201ENST00000272793 C14orf178Q8N769 122 aaPredicted RBP13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BHQ93079 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BNQ99877 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BMQ99879 126 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 A0A0U1RQV1 116 aa13.11□□□□□ -0.31
UBR3-201ENST00000272793 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
UBR3-201ENST00000272793 CRYGCP07315 174 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 NDUFB1O75438 58 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 F6UB75 175 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 IGKV4-1P06312 121 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 IGHV4OR15-8A0A075B7B6 117 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 A0A087WW49 117 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 A0A1B0GX51 115 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 PMS2P5A8MQ11 134 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 RNASE2P10153 161 aaKnown RBP13.1□□□□□ -0.31
UBR3-201ENST00000272793 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 ACP7Q6ZNF0 438 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 UBE2CO00762 179 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 PPDPFLQ8WWR9 84 aa13.1□□□□□ -0.31
UBR3-201ENST00000272793 GNLYP22749 145 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBR3-201ENST00000272793 C15orf53Q8NAA6 179 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 HIST1H2BLQ99880 126 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 NDUFS6O75380 124 aaKnown RBP13.09□□□□□ -0.31
UBR3-201ENST00000272793 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 LY6G5BQ8NDX9 201 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 TMEM52Q8NDY8 209 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 NDPQ00604 133 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 OCC1Q8TAD7 63 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 ORMDL1Q9P0S3 153 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
UBR3-201ENST00000272793 TRBV25-1A0A075B6N4 114 aa13.08□□□□□ -0.31
UBR3-201ENST00000272793 TSKUQ8WUA8 353 aa13.08□□□□□ -0.31
UBR3-201ENST00000272793 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.31
UBR3-201ENST00000272793 STRCP1A6NGW2 1772 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 STRCQ7RTU9 1775 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 BMPERQ8N8U9 685 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 C17orf98A8MV24 154 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 RAMP3O60896 148 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.32
UBR3-201ENST00000272793 TFF2Q03403 129 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 FSTP19883 344 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 LOC101059948A0A1B0GTJ6 334 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 STPG4Q8N801 248 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 OSTCQ9NRP0 149 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 LINC00527Q9UJ94 153 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
UBR3-201ENST00000272793 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 TMEM219Q86XT9 240 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 TRAV13-2A0A0B4J235 113 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 F8W1H4 67 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 ANAPC1Q9H1A4 1944 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 A0A1W2PPV9 198 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 ZNF721Q8TF20 911 aa13.07□□□□□ -0.32
UBR3-201ENST00000272793 MRPS18AQ9NVS2 196 aaKnown RBP13.07□□□□□ -0.32
UBR3-201ENST00000272793 CARHSP1Q9Y2V2 147 aaKnown RBP13.07□□□□□ -0.32
UBR3-201ENST00000272793 C1QTNF4Q9BXJ3 329 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 PRSS29PA6NIE9 313 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 CDKN1BP46527 198 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
UBR3-201ENST00000272793 RHODO00212 210 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 NCOR1P1Q9H4R4 102 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 Q96M66 194 aa13.06□□□□□ -0.32
UBR3-201ENST00000272793 COX14Q96I36 57 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms