RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
ZNF541-201ENST00000263351 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 LOXL1Q08397 574 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-201ENST00000263351 Q86TA4 180 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 TEX22C9J3V5 150 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 TOMM40O96008 361 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 TMEM155Q4W5P6 130 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 SIGLEC9Q9Y336 463 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 COX11Q9Y6N1 276 aa13.12□□□□□ -0.31
ZNF541-201ENST00000263351 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-201ENST00000263351 SFTPCP11686 197 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 NUP37Q8NFH4 326 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
ZNF541-201ENST00000263351 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
ZNF541-201ENST00000263351 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-201ENST00000263351 A0A087X0K7 114 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 E7EQL1 145 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 CHEK1O14757 476 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 RNASE6Q93091 150 aaKnown RBP13.11□□□□□ -0.31
ZNF541-201ENST00000263351 DYNLRB1Q9NP97 96 aa13.11□□□□□ -0.31
ZNF541-201ENST00000263351 IGF2RP11717 2491 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
ZNF541-201ENST00000263351 CBY3A6NI87 242 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 A8MWL6 223 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 NUDT3O95989 172 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 IGLC1P0CG04 106 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 PCP4P48539 62 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 ATP5IP56385 69 aaPredicted RBP13.1□□□□□ -0.31
ZNF541-201ENST00000263351 IGFL4Q6B9Z1 124 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 MUC15Q8N387 334 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 INS-IGF2F8WCM5 200 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 APOHP02749 345 aaPredicted RBP13.1□□□□□ -0.31
ZNF541-201ENST00000263351 RASL11AQ6T310 242 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
ZNF541-201ENST00000263351 COL6A6A6NMZ7 2263 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 LOC389332A0A1B0GUA5 103 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 CRIP1P50238 77 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
ZNF541-201ENST00000263351 TRGV9Q99603 122 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
ZNF541-201ENST00000263351 INSIG2Q9Y5U4 225 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 IGHV1-3A0A0C4DH29 117 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 C8orf46Q8TAG6 207 aa13.09□□□□□ -0.31
ZNF541-201ENST00000263351 PLGLAQ15195 96 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 PPP1R27Q86WC6 154 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 IGHV3-35A0A0C4DH35 117 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 OR4A5Q8NH83 315 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 HILPDAQ9Y5L2 63 aa13.08□□□□□ -0.32
ZNF541-201ENST00000263351 CRYGBP07316 175 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 HTR1DP28221 377 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 F11RQ9Y624 299 aaKnown RBP13.07□□□□□ -0.32
ZNF541-201ENST00000263351 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 GRNP28799 593 aaKnown RBP13.07□□□□□ -0.32
ZNF541-201ENST00000263351 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
ZNF541-201ENST00000263351 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
ZNF541-201ENST00000263351 UBE2V1Q13404 147 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 VAMP3Q15836 100 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 LINC00311Q8N616 119 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 ORAOV1Q8WV07 137 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 IGHV1-69-2A0A0G2JMI3 117 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 I3L2K1 104 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 KLRD1Q13241 179 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 C3orf36Q3SXR2 165 aa13.06□□□□□ -0.32
ZNF541-201ENST00000263351 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
ZNF541-201ENST00000263351 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 RBX1P62877 108 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 C22orf15Q8WYQ4 148 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 RASL11BQ9BPW5 248 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 TAX1BP3O14907 124 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 CNIH1O95406 144 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 TMEM30BQ3MIR4 351 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 LINC01560Q8TB33 94 aa13.05□□□□□ -0.32
ZNF541-201ENST00000263351 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
ZNF541-201ENST00000263351 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 MC5RP33032 325 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 LGALS7P47929 136 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 STXBP6Q8NFX7 210 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms