RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.85□□□□□ -0.83
SMG6-201ENST00000263073 RPRMLQ8N4K4 120 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 TRPM7Q96QT4 1865 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 DLX4Q92988 240 aaPredicted RBP9.85□□□□□ -0.83
SMG6-201ENST00000263073 SRRM4A7MD48 611 aaKnown RBP9.85□□□□□ -0.83
SMG6-201ENST00000263073 IGKV1-16P04430 117 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 FCN3O75636 299 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 LY6HO94772 140 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 WISP1O95388 367 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 PAX4O43316 350 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 ZNF562Q6V9R5 426 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 VMO1Q7Z5L0 202 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 ANK1P16157 1881 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 ZNF688P0C7X2 276 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 SSBP2P81877 361 aaPredicted RBP9.84□□□□□ -0.83
SMG6-201ENST00000263073 S100A7L2Q5SY68 101 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 Q6ZWC4 215 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 HAPLN4Q86UW8 402 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 IGHV2-70P01814 119 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 UCNP55089 124 aa9.84□□□□□ -0.83
SMG6-201ENST00000263073 IGLV3-12A0A075B6K2 115 aa9.84□□□□□ -0.84
SMG6-201ENST00000263073 LTBRP36941 435 aa9.84□□□□□ -0.84
SMG6-201ENST00000263073 NSUN5P1Q3KNT7 163 aa9.84□□□□□ -0.84
SMG6-201ENST00000263073 WNT2P09544 360 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
SMG6-201ENST00000263073 Q6P435 159 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 LRRK1Q38SD2 2015 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 TRAV26-2A0A0B4J265 109 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 IL18BPO95998 194 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 SRSF8Q9BRL6 282 aaKnown RBP9.83□□□□□ -0.84
SMG6-201ENST00000263073 H0YJW9 148 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 LYL1P12980 280 aa9.83□□□□□ -0.84
SMG6-201ENST00000263073 TSSC4Q9Y5U2 329 aaPredicted RBP9.83□□□□□ -0.84
SMG6-201ENST00000263073 FAM90A9PA6NNJ1 464 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 TMEM238C9JI98 176 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 Q0VFX4 171 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 ZNF726P1Q15940 193 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 NEU4Q8WWR8 484 aaPredicted RBP9.82□□□□□ -0.84
SMG6-201ENST00000263073 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 IGLV3-32A0A0A0MS00 114 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 PTPRDP23468 1912 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 AHCTF1Q8WYP5 2266 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 TRAV13-1A0A0B4J241 112 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 WIPF3A6NGB9 483 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 K7ERJ3 54 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 LYPD2Q6UXB3 125 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 RALGAPA2Q2PPJ7 1873 aa9.82□□□□□ -0.84
SMG6-201ENST00000263073 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
SMG6-201ENST00000263073 KIAA2026Q5HYC2 2103 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 IGKV1-6A0A0C4DH72 117 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 CD5LO43866 347 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 C18orf32Q8TCD1 76 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 FHL1Q13642 323 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 MRPS18CQ9Y3D5 142 aaKnown RBP9.81□□□□□ -0.84
SMG6-201ENST00000263073 IGKV1D-17A0A075B6S4 117 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 LOC102723996A0A087X1L8 192 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 TRAV41A0A0B4J266 112 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 A0A1B0GWJ7 208 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 SRRM5B3KS81 715 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 THBDP07204 575 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 TCF15Q12870 199 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 C1orf159Q96HA4 380 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 SMPXQ9UHP9 88 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 SCN10AQ9Y5Y9 1956 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 TOMM40O96008 361 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 SLAQ13239 276 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
SMG6-201ENST00000263073 MRPL27Q9P0M9 148 aaKnown RBP9.8□□□□□ -0.84
SMG6-201ENST00000263073 AKAP6Q13023 2319 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 CRPP02741 224 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 Q86TA4 180 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
SMG6-201ENST00000263073 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 NEGR1Q7Z3B1 354 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 GAFA1Q96PS6 74 aa9.8□□□□□ -0.84
SMG6-201ENST00000263073 KNCNA6PVL3 124 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 ITGB1BP1O14713 200 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 SRSF7Q16629 238 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-201ENST00000263073 RASL11AQ6T310 242 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 RNASE6Q93091 150 aaKnown RBP9.79□□□□□ -0.84
SMG6-201ENST00000263073 DOCK11Q5JSL3 2073 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 TRGV9Q99603 122 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 LIME1Q9H400 295 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 CEP250Q9BV73 2442 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 PFN1P07737 140 aaKnown RBP9.79□□□□□ -0.84
SMG6-201ENST00000263073 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
SMG6-201ENST00000263073 TRGV11A0A075B6L2 103 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 OVOL1O14753 267 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 ZNF672Q499Z4 452 aaPredicted RBP9.79□□□□□ -0.84
SMG6-201ENST00000263073 ASCL4Q6XD76 172 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 JPT2Q9H910 190 aa9.79□□□□□ -0.84
SMG6-201ENST00000263073 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms