RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 C1orf43Q9BWL3 253 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 TMEM160Q9NX00 188 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 ANAPC10Q9UM13 185 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 PCNX3Q9H6A9 2034 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 COLCA1Q6ZS62 124 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 LRRC29Q8WV35 223 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 CCL17Q92583 94 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 FLYWCH2Q96CP2 140 aaKnown RBP6.88□□□□□ -1.31
LDB3-201ENST00000263066 ERVK11-1P61568 191 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 KLRB1Q12918 225 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 PEAR1Q5VY43 1037 aaPredicted RBP6.87□□□□□ -1.31
LDB3-201ENST00000263066 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 PPP1R27Q86WC6 154 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 TAAR6Q96RI8 345 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 CEP192Q8TEP8 1941 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 TMEM155Q4W5P6 130 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
LDB3-201ENST00000263066 OR2H2O95918 312 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 NTF4P34130 210 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 RPL13AP40429 203 aaKnown RBP6.87□□□□□ -1.31
LDB3-201ENST00000263066 TTTY13Q9BZ97 58 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
LDB3-201ENST00000263066 AMMECR1Q9Y4X0 333 aaPredicted RBP6.87□□□□□ -1.31
LDB3-201ENST00000263066 IGLV3-21P80748 117 aaPredicted RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 ADIPOQQ15848 244 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 TIMD4Q96H15 378 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 LINC00479Q96M42 142 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 MALRD1Q5VYJ5 2156 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 TMEM8BA6NDV4 472 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 GNG5P63218 68 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 CCL8P80075 99 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 MIR17HGQ75NE6 70 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 RPEQ96AT9 228 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 ZNF524Q96C55 264 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 TRAV24A0A0B4J272 114 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 C5orf63A6NC05 138 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 NCBP2LA6PVI3 153 aaKnown RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 EFNA2O43921 213 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 ABHD12Q8N2K0 398 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 C9orf106Q8NAJ2 232 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 FAM168AQ92567 244 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 BEX4Q9NWD9 120 aaPredicted RBP6.86□□□□□ -1.31
LDB3-201ENST00000263066 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 EML5Q05BV3 1969 aa6.86□□□□□ -1.31
LDB3-201ENST00000263066 DEFB108AA8MXU0 73 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 C9JCJ5 164 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 ATP5IP56385 69 aaPredicted RBP6.85□□□□□ -1.31
LDB3-201ENST00000263066 TBC1D28Q2M2D7 210 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 PRRC2AP48634 2157 aaKnown RBP6.85□□□□□ -1.31
LDB3-201ENST00000263066 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 FCGR3BO75015 233 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 PLAUP00749 431 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 SUMO3P55854 103 aaPredicted RBP6.85□□□□□ -1.31
LDB3-201ENST00000263066 SPRR3Q9UBC9 169 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 K7ENP7 123 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 PCBD1P61457 104 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 RFESDQ8TAC1 157 aa6.85□□□□□ -1.31
LDB3-201ENST00000263066 IGLL5B9A064 214 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 IGKV1-5P01602 117 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 ZNF688P0C7X2 276 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
LDB3-201ENST00000263066 DUX4L9Q6RFH8 374 aaPredicted RBP6.84□□□□□ -1.31
LDB3-201ENST00000263066 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 GNG12Q9UBI6 72 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 MPDU1O75352 247 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 RPL30P62888 115 aaKnown RBP6.84□□□□□ -1.31
LDB3-201ENST00000263066 OR4C13Q8NGP0 309 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 AAMDCQ9H7C9 122 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 CFAP46Q8IYW2 2715 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 RIGQ13278 110 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 C2orf91Q6ZV80 131 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 MDP1Q86V88 176 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 ZNF488Q96MN9 340 aa6.84□□□□□ -1.31
LDB3-201ENST00000263066 DSCAML1Q8TD84 2053 aa6.84□□□□□ -1.32
LDB3-201ENST00000263066 IGHV3-43A0A0B4J1X8 118 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 A0A1W2PQD3 144 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 FAM90A26D6RGX4 464 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 MS4A18H0YCH9 400 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 C16orf97H3BN30 126 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 NGFP01138 241 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 IGHV3-43DP0DP04 118 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 MS4A18Q3C1V0 323 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 TMEM14EPQ6UXP3 125 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 C8orf46Q8TAG6 207 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms