RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CGAP01215 116 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 MSMBP08118 114 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 APOC4P55056 127 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 C5orf30Q96GV9 206 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 TRAV9-2A0A087WT02 112 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 A8MWV9 139 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 TPRX1Q8N7U7 411 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 LINC01587Q99440 93 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 IGHV3-7P01780 117 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
VPS13C-202ENST00000261517 UBE2CO00762 179 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 DMRTC1Q5HYR2 192 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 ARFGEF3Q5TH69 2177 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 CTSBP07858 339 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 CELA3BP08861 270 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 HSD52Q0P140 79 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF841Q6ZN19 808 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 REG1AP05451 166 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 PSG3Q16557 428 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 CHD9Q3L8U1 2897 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 DAZAP2Q15038 168 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-202ENST00000261517 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 THAP8Q8NA92 274 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF48Q96MX3 618 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-202ENST00000261517 PCDH15Q96QU1 1955 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 TCF21O43680 179 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 Q0VFX4 171 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 IGHV3-72A0A0B4J1Y9 119 aa3.53□□□□□ -1.84
VPS13C-202ENST00000261517 LINC00614P0C842 121 aa3.53□□□□□ -1.85
VPS13C-202ENST00000261517 PLP1P60201 277 aa3.53□□□□□ -1.85
VPS13C-202ENST00000261517 C15orf32Q32M92 178 aa3.53□□□□□ -1.85
VPS13C-202ENST00000261517 ISOC2Q96AB3 205 aa3.53□□□□□ -1.85
VPS13C-202ENST00000261517 RTN4RQ9BZR6 473 aa3.53□□□□□ -1.85
VPS13C-202ENST00000261517 IGHV1-69DA0A0B4J2H0 117 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 IGHV1-69P01742 117 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 RASL10AQ92737 203 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TRAV39A0A0B4J263 110 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TRBV7-9A0A0J9YWB2 115 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 EIF3GO75821 320 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 CRPP02741 224 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 FOXF2Q12947 444 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 H0YIZ8 118 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 SPINK4O60575 86 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 APOHP02749 345 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TFF3Q07654 80 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 C16orf54Q6UWD8 224 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TRPT1Q86TN4 253 aaKnown RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 A0A0A6YYD4 124 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TRAV25A0A0B4J276 109 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 LY6G6EA0A0G2JKS1 128 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 RNF151Q2KHN1 245 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 VKORC1L1Q8N0U8 176 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 NDUFA4L2Q9NRX3 87 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 PRR13Q9NZ81 148 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 U3KQA8 63 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 SCO2A0A1W2PP80 73 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 EFNA2O43921 213 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 WFDC3Q8IUB2 231 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 C20orf144Q9BQM9 153 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TANC2Q9HCD6 1990 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TCRAP04437 139 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 CENPEQ02224 2701 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1D-13A0A0B4J2D9 117 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1-13P0DP09 117 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 ARTNQ5T4W7 220 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 OR11H6Q8NGC7 330 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 AKIRIN1Q9H9L7 192 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 XIRP2A4UGR9 3374 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 SETD2Q9BYW2 2564 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TRGV2A0A075B6R0 118 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 LINC00518Q8N0U6 118 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 CD177Q8N6Q3 437 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 OR2K2Q8NGT1 345 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 LOC389332A0A1B0GUA5 103 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 SHISA3A0PJX4 238 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 MALP21145 153 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 HGFACQ04756 655 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 GFI1Q99684 422 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 MUC22E2RYF6 1773 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 TMEM50AO95807 157 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 RNASE4P34096 147 aaKnown RBP3.52□□□□□ -1.85
VPS13C-202ENST00000261517 Q0VG73 95 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 MIR17HGQ75NE6 70 aa3.52□□□□□ -1.85
VPS13C-202ENST00000261517 EXPH5Q8NEV8 1989 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 SEPSECSQ9HD40 501 aaKnown RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 A0A1W2PRD5 423 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 A0A1W2PRF3 423 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 A0A1W2PRM7 423 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 CD7P09564 240 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 RNASE2P10153 161 aaKnown RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 MGST2Q99735 147 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 WNK1Q9H4A3 2382 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 PRSS46E5RG02 174 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IL15RAQ13261 267 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1D-17A0A075B6S4 117 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 RAMP3O60896 148 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms