RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CD5LO43866 347 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
LMNB1-201ENST00000261366 FAM27E3Q08E93 113 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 TMEM200BQ69YZ2 307 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 Q86TA4 180 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 OR5AN1Q8NGI8 311 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 CCL17Q92583 94 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 PEF1Q9UBV8 284 aaKnown RBP12.7□□□□□ -0.38
LMNB1-201ENST00000261366 S4R3C0 116 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 GP9P14770 177 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
LMNB1-201ENST00000261366 ZNF292O60281 2723 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 RBP4P02753 201 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 ATP5IP56385 69 aaPredicted RBP12.69□□□□□ -0.38
LMNB1-201ENST00000261366 FCN3O75636 299 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 TNFRSF1AP19438 455 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 TMEM97Q5BJF2 176 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 STXBP6Q8NFX7 210 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 FAM222BQ8WU58 562 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
LMNB1-201ENST00000261366 LINC00312Q9Y6C7 94 aa12.69□□□□□ -0.38
LMNB1-201ENST00000261366 A0A1B0GUT8 65 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 K7ERU9 68 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 THYN1Q9P016 225 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 WNK2Q9Y3S1 2297 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 DEFB109BQ30KR1 87 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 JMJD8Q96S16 334 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
LMNB1-201ENST00000261366 COX8AP10176 69 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 VSTM2AQ8TAG5 236 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 M0R3E3 92 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 VMA21Q3ZAQ7 101 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 CSTL1Q9H114 145 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 HIGD1AQ9Y241 93 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 TM4SF5O14894 197 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 NMUP48645 174 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 CACNG7P62955 275 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 CACNA1BQ00975 2339 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 IGFBPL1Q8WX77 278 aa12.67□□□□□ -0.38
LMNB1-201ENST00000261366 IGLC1P0CG04 106 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 MALRD1Q5VYJ5 2156 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 D6R8Y8 96 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 SMKR1H3BMG3 65 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
LMNB1-201ENST00000261366 IGLV3-9A0A075B6K5 115 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 CSN1S1P47710 185 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 ZNF492Q9P255 531 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 SOX21Q9Y651 276 aaPredicted RBP12.65□□□□□ -0.38
LMNB1-201ENST00000261366 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 RPL27AP46776 148 aaKnown RBP12.65□□□□□ -0.38
LMNB1-201ENST00000261366 CT83Q5H943 113 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.38
LMNB1-201ENST00000261366 LRBAP50851 2863 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 HAX1O00165 279 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 GATA4P43694 442 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 AMN1Q8IY45 258 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 SLC25A39Q9BZJ4 359 aaPredicted RBP12.64□□□□□ -0.39
LMNB1-201ENST00000261366 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 C8orf49Q96NF6 230 aa12.64□□□□□ -0.39
LMNB1-201ENST00000261366 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
LMNB1-201ENST00000261366 K7EMI3 77 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 RIGQ13278 110 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 KIR3DS1Q14943 382 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 TTTY13Q9BZ97 58 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 NCOR1P1Q9H4R4 102 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 SH3BGRL2Q9UJC5 107 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 PTPRZ1P23471 2315 aaPredicted RBP12.63□□□□□ -0.39
LMNB1-201ENST00000261366 MRGPRG-AS1Q2M3A8 158 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 TRGV9Q99603 122 aa12.63□□□□□ -0.39
LMNB1-201ENST00000261366 GOSR1O95249 250 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 FBXL15Q9H469 300 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 LINC00574Q9H8X3 128 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 SIGLEC8Q9NYZ4 499 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 A0A096LNJ9 63 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 CRIP1P50238 77 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 PLGLAQ15195 96 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
LMNB1-201ENST00000261366 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms