RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ZNF833PQ6ZTB9 187 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 TEX45Q8NA69 505 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 RAB37Q96AX2 223 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 FXYD5Q96DB9 178 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 FMC1Q96HJ9 113 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 ALKBH7Q9BT30 221 aaPredicted RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 PTPRQQ9UMZ3 2332 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 ANKRD11Q6UB99 2663 aaPredicted RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 LOC400499M0QZD8 3231 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 IGKV3-7A0A075B6H7 116 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 IGHV2-26A0A0B4J1V2 119 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 TIMM23O14925 209 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 CKS2P33552 79 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 TM4SF20Q53R12 229 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 EBLN2Q6P2I7 272 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 FAM169BQ8N8A8 192 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 C8orf46Q8TAG6 207 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 SLC25A39Q9BZJ4 359 aaPredicted RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 TP73-AS1Q9UF72 201 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 SIGLEC9Q9Y336 463 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 UFC1Q9Y3C8 167 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 F11RQ9Y624 299 aaKnown RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 A0A087X0K7 114 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 OR2J3O76001 311 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 CGB3P0DN86 165 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 CGB7P0DN87 165 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 CEACAM3P40198 252 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 SCGB2A2Q13296 93 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 PRR30Q53SZ7 412 aaPredicted RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 IGFL4Q6B9Z1 124 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 Q6ZS92 163 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 LINC00173Q6ZV60 143 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 SMIM15Q7Z3B0 74 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 OR10AG1Q8NH19 301 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 OR4A5Q8NH83 315 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 NAA38Q9BRA0 125 aaKnown RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 MRPL27Q9P0M9 148 aaKnown RBP3.81□□□□□ -1.8
USP44-201ENST00000258499 ADAMTS20P59510 1910 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 DSCAMO60469 2012 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 IGHV1-3A0A0C4DH29 117 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 FBLL1A6NHQ2 334 aaKnown RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 C22orf46C9J442 243 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 SYS1-DBNDD2H3BUS1 97 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 IGLV2-8P01709 118 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 ARMS2P0C7Q2 107 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 LOXP28300 417 aaPredicted RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 PPIFP30405 207 aaKnown RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 ARL3P36405 182 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 RELQ04864 619 aaPredicted RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 GUSBP1Q15486 140 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 IGF2BP2-AS1Q96M15 143 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 PRO3102Q9H379 93 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 OTORQ9NRC9 128 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 THYN1Q9P016 225 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 CTSZQ9UBR2 303 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 PSG8Q9UQ74 426 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 DYSFO75923 2080 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 APOBEC3AP31941 199 aaPredicted RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 KLRD1Q13241 179 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 RNF125Q96EQ8 232 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 C17orf77Q96MU5 243 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 NCOR2Q9Y618 2525 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 OR2T8A6NH00 312 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 CCL21O00585 134 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 ZNF207O43670 478 aaKnown RBP3.8□□□□□ -1.8
USP44-201ENST00000258499 CLEC3BP05452 202 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 CR1LQ2VPA4 569 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 FBLN7Q53RD9 439 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 ATP5L2Q7Z4Y8 100 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 Q8TAT8 98 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 TRGV9Q99603 122 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 RAB1BQ9H0U4 201 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
USP44-201ENST00000258499 IGKV2-40A0A087WW87 121 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 NPIPB5A8MRT5 1133 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 E7EQL1 145 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 NCR2O95944 276 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 TOMM40O96008 361 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 IGKV2D-40P01614 121 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 MFAP4P55083 255 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 GDF5OSQ5U4N7 250 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 TEX36Q5VZQ5 186 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 PRELID3AQ96N28 172 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 DPM3Q9P2X0 92 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 IGHV1-24A0A0C4DH33 117 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 B9A039 149 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 S100A7P31151 101 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 COMPP49747 757 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 LDLRAD2Q5SZI1 272 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 RASL11AQ6T310 242 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 LINC00322Q6ZN03 302 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 FAM231DQ6ZW35 169 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 Q86TA4 180 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 NUP37Q8NFH4 326 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 ARHGAP32A7KAX9 2087 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms