RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FAM169BQ8N8A8 192 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 TMEM178AQ8NBL3 297 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 TMEM116Q8NCL8 245 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 PLSCR4Q9NRQ2 329 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 SMPXQ9UHP9 88 aa9.18□□□□□ -0.94
TROAP-201ENST00000257909 H3BTX0 84 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 SPRY3O43610 288 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 HBDP02042 147 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 MSMPQ1L6U9 139 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 PEAR1Q5VY43 1037 aaPredicted RBP9.17□□□□□ -0.94
TROAP-201ENST00000257909 FER1L6-AS2Q96M78 137 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 TMEM14CQ9P0S9 112 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 TRIOBPQ9H2D6 2365 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 FAM106AQ4KMX7 169 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 TMEM75Q8N9X5 138 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 PIFOQ8TCI5 191 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 U3KQK5 164 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 KNTC1P50748 2209 aa9.17□□□□□ -0.94
TROAP-201ENST00000257909 PPIAL4CA0A0B4J2A2 164 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 TEX48A0A1B0GUV7 120 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 A0A1B0GV72 72 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 AZU1P20160 251 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 NMUP48645 174 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 LOXL1Q08397 574 aaPredicted RBP9.16□□□□□ -0.94
TROAP-201ENST00000257909 PVRIGQ6DKI7 326 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 ZNF788Q6ZQV5 615 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 ZNF48Q96MX3 618 aaPredicted RBP9.16□□□□□ -0.94
TROAP-201ENST00000257909 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 CCL13Q99616 98 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 HIGD1BQ9P298 99 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 LOC389332A0A1B0GUA5 103 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 A0A1W2PNU3 283 aaPredicted RBP9.16□□□□□ -0.94
TROAP-201ENST00000257909 D6R8Y8 96 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 J3QR89 54 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 K7EQM0 130 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 FTH1P19P0C7X4 201 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 MEF2CQ06413 473 aaPredicted RBP9.16□□□□□ -0.94
TROAP-201ENST00000257909 VMA21Q3ZAQ7 101 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 ORMDL3Q8N138 153 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 IFI27L1Q96BM0 104 aa9.16□□□□□ -0.94
TROAP-201ENST00000257909 URB1O60287 2271 aaKnown RBP9.16□□□□□ -0.94
TROAP-201ENST00000257909 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 FAM216BQ8N7L0 139 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 VGLL1Q99990 258 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 NAV3Q8IVL0 2385 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 RAI1Q7Z5J4 1906 aaPredicted RBP9.15□□□□□ -0.94
TROAP-201ENST00000257909 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 ZNF785A8K8V0 405 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 CD300EQ496F6 205 aaPredicted RBP9.15□□□□□ -0.94
TROAP-201ENST00000257909 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 TECTAO75443 2155 aa9.15□□□□□ -0.94
TROAP-201ENST00000257909 IGHG3P01860 377 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 TNFRSF1AP19438 455 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 GLRXP35754 106 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 DHRS13Q6UX07 377 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 C1orf122Q6ZSJ8 110 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 C9orf106Q8NAJ2 232 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 GTSF1LQ9H1H1 148 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 SLC25A15Q9Y619 301 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 DSPP15924 2871 aaKnown RBP9.14□□□□□ -0.95
TROAP-201ENST00000257909 SHISA9B4DS77 424 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 TCTAP57738 103 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 PAX8Q06710 450 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 TPPP3Q9BW30 176 aa9.14□□□□□ -0.95
TROAP-201ENST00000257909 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
TROAP-201ENST00000257909 ZNF71Q9NQZ8 489 aaPredicted RBP9.14□□□□□ -0.95
TROAP-201ENST00000257909 F8W1H4 67 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 GCSHP23434 173 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
TROAP-201ENST00000257909 HCP5Q6MZN7 132 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
TROAP-201ENST00000257909 PSG8Q9UQ74 426 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 F11RQ9Y624 299 aaKnown RBP9.13□□□□□ -0.95
TROAP-201ENST00000257909 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
TROAP-201ENST00000257909 IGLV3-9A0A075B6K5 115 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 NKX2-8O15522 239 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 SLC25A17O43808 307 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 NDUFS7O75251 213 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 MC5RP33032 325 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 LYZP61626 148 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 TNFAIP6P98066 277 aaPredicted RBP9.13□□□□□ -0.95
TROAP-201ENST00000257909 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 FOXI2Q6ZQN5 318 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 LOC400499M0QZD8 3231 aa9.13□□□□□ -0.95
TROAP-201ENST00000257909 PPIAL4EA0A075B759 164 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 FBLL1A6NHQ2 334 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms