RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 GTSF1Q8WW33 167 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 RNF125Q96EQ8 232 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 FANCD2OSQ96PS1 177 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 OTORQ9NRC9 128 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 H3BRN7 92 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 IGLV2-11P01706 119 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 UBTD1Q9HAC8 227 aa13.02□□□□□ -0.33
UBQLN1-201ENST00000257468 C19orf71A6NCJ1 209 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 P01737 135 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 PRSS22Q9GZN4 317 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 TRBV19A0A075B6N1 114 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 OR2D3Q8NGH3 330 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 SMIM12Q96EX1 92 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 CHRDL1Q9BU40 450 aa13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 ZMAT5Q9UDW3 170 aaKnown RBP13.01□□□□□ -0.33
UBQLN1-201ENST00000257468 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 EREGO14944 169 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 GNG7O60262 68 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 TEX43Q6ZNM6 134 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 PRORYQ9H606 182 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 PAM16Q9Y3D7 125 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 VPS13CQ709C8 3753 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 A0A1B0GXF2 115 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 F8W735 103 aaPredicted RBP13□□□□□ -0.33
UBQLN1-201ENST00000257468 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
UBQLN1-201ENST00000257468 IGLC2P0DOY2 106 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 NTF3P20783 257 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 RASL11AQ6T310 242 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 BPIFA4PQ86YQ2 179 aa13□□□□□ -0.33
UBQLN1-201ENST00000257468 HLA-DRB1P01911 266 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 UQCRFS1P47985 274 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 Q8N976 141 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 ZNF785A8K8V0 405 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 Q56UQ5 140 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 FAM120AOSQ5T036 256 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 SIGLEC15Q6ZMC9 328 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 NIT1Q86X76 327 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 Q8N6K4 173 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 LINC00469Q8N7U9 141 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 OR4F17Q8NGA8 305 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 DAZAP1Q96EP5 407 aaKnown RBP12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 AKAP6Q13023 2319 aa12.99□□□□□ -0.33
UBQLN1-201ENST00000257468 WI2-2373I1.2A0A1W2PRP0 233 aa12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 M0R3E3 92 aa12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 MRPS12O15235 138 aaKnown RBP12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 NDUFB8O95169 186 aa12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 TMEM11P17152 192 aa12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 ALKBH7Q9BT30 221 aaPredicted RBP12.98□□□□□ -0.33
UBQLN1-201ENST00000257468 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 A8MWL6 223 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 OR2J3O76001 311 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 SFTPCP11686 197 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 COL8A1P27658 744 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 HBBP68871 147 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 ZC2HC1AQ96GY0 325 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
UBQLN1-201ENST00000257468 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 DIRC3C9JPN6 131 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 C19orf84I3L1E1 186 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 MFAP4P55083 255 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 C1orf122Q6ZSJ8 110 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 TTC9CQ8N5M4 171 aa12.96□□□□□ -0.33
UBQLN1-201ENST00000257468 C3orf79P0CE67 100 aa12.96□□□□□ -0.34
UBQLN1-201ENST00000257468 RNF224P0DH78 156 aa12.96□□□□□ -0.34
UBQLN1-201ENST00000257468 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.34
UBQLN1-201ENST00000257468 IGHV7-81A0A0B4J1V7 117 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 M0QZ24 198 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 CT83Q5H943 113 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 RNASEKQ6P5S7 137 aaKnown RBP12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 VAMP8Q9BV40 100 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 C2orf88Q9BSF0 95 aa12.95□□□□□ -0.34
UBQLN1-201ENST00000257468 EBI3Q14213 229 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 MINOS1Q5TGZ0 78 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 Q8N9W7 124 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 LPAR2Q9HBW0 351 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 MINOS1-NBL1R4GNA1 71 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 CELSR1Q9NYQ6 3014 aa12.94□□□□□ -0.34
UBQLN1-201ENST00000257468 IGHV2-70DA0A0C4DH43 119 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms