RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TMEM183AQ8IXX5 376 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 C11orf52Q96A22 123 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 TLN2Q9Y4G6 2542 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 TOMM40O96008 361 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 CRYBB3P26998 211 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 CRIP2P52943 208 aaPredicted RBP14.72□□□□□ -0.05
TRIM47-201ENST00000254816 Q6YL49 198 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 PACRGQ96M98 296 aaPredicted RBP14.72□□□□□ -0.05
TRIM47-201ENST00000254816 CHRDL1Q9BU40 450 aa14.72□□□□□ -0.05
TRIM47-201ENST00000254816 TRAV30A0A087WSZ9 112 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 SLC17A3O00476 420 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 IGF1P05019 195 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 IL4P05112 153 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 UBE2L3P68036 154 aaKnown RBP14.71□□□□□ -0.05
TRIM47-201ENST00000254816 CTAG1AP78358 180 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 TMEM95Q3KNT9 176 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 OR10G8Q8NGN5 311 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 PAXXQ9BUH6 204 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 TMEM167BQ9NRX6 74 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 HIGD1AQ9Y241 93 aa14.71□□□□□ -0.05
TRIM47-201ENST00000254816 GGTLC3B5MD39 225 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 CTSGP08311 255 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 GPR183P32249 361 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 KLK9Q2XQG4 91 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 ZNF491Q8N8L2 437 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 ZNF502Q8TBZ5 544 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 VN1R17PQ8TDU5 208 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 KLK9Q9UKQ9 250 aa14.71□□□□□ -0.06
TRIM47-201ENST00000254816 IGHV3-35A0A0C4DH35 117 aa14.7□□□□□ -0.06
TRIM47-201ENST00000254816 HOXA3O43365 443 aaPredicted RBP14.7□□□□□ -0.06
TRIM47-201ENST00000254816 OR5I1Q13606 314 aa14.7□□□□□ -0.06
TRIM47-201ENST00000254816 RNF125Q96EQ8 232 aa14.7□□□□□ -0.06
TRIM47-201ENST00000254816 ADMP35318 185 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 YPEL3P61236 119 aaPredicted RBP14.69□□□□□ -0.06
TRIM47-201ENST00000254816 SLC25A39Q9BZJ4 359 aaPredicted RBP14.69□□□□□ -0.06
TRIM47-201ENST00000254816 MRPL27Q9P0M9 148 aaKnown RBP14.69□□□□□ -0.06
TRIM47-201ENST00000254816 CLEC3BP05452 202 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 RPL15P61313 204 aaKnown RBP14.69□□□□□ -0.06
TRIM47-201ENST00000254816 FOXL1Q12952 345 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 CENPWQ5EE01 88 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 OR5R1Q8NH85 324 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 CCDC140Q96MF4 163 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
TRIM47-201ENST00000254816 WI2-2373I1.2A0A1W2PRP0 233 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 TRGV3P03979 118 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 PPIFP30405 207 aaKnown RBP14.68□□□□□ -0.06
TRIM47-201ENST00000254816 SUMO1P63165 101 aaKnown RBP14.68□□□□□ -0.06
TRIM47-201ENST00000254816 USF2Q15853 346 aaPredicted RBP14.68□□□□□ -0.06
TRIM47-201ENST00000254816 CLEC19AQ6UXS0 136 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 FXYD5Q96DB9 178 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 IMMP2LQ96T52 175 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 VPREB3Q9UKI3 123 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 TRAPPC1Q9Y5R8 145 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 C9JCJ5 164 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 AMBPP02760 352 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 KRTAP1-1Q07627 177 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 TXN2Q99757 166 aa14.68□□□□□ -0.06
TRIM47-201ENST00000254816 IGHV3OR16-8A0A075B7F1 116 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 HELTA6NFD8 242 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 GNG4P50150 75 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 H3BTX0 84 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 FCGR2BP31994 310 aaPredicted RBP14.67□□□□□ -0.06
TRIM47-201ENST00000254816 ATP5G2Q06055 141 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 LCNL1Q6ZST4 164 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 BLNKQ8WV28 456 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 EEF1AKMT3Q96AZ1 226 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 GNB4Q9HAV0 340 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 ARL2-SNX15V9GYD0 113 aa14.67□□□□□ -0.06
TRIM47-201ENST00000254816 TPPP2P59282 170 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 SIGLECL1Q8N7X8 197 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 ZNF414Q96IQ9 312 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 KLK15Q9H2R5 256 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 A0A1B0GUS0 222 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 ERVFC1-1P60608 527 aa14.66□□□□□ -0.06
TRIM47-201ENST00000254816 COA6Q5JTJ3 125 aaKnown RBP14.66□□□□□ -0.06
TRIM47-201ENST00000254816 ACANP16112 2415 aa14.65□□□□□ -0.06
TRIM47-201ENST00000254816 SONP18583 2426 aaKnown RBP14.65□□□□□ -0.06
TRIM47-201ENST00000254816 GP9P14770 177 aa14.65□□□□□ -0.06
TRIM47-201ENST00000254816 CNN1P51911 297 aaKnown RBP14.65□□□□□ -0.06
TRIM47-201ENST00000254816 IL36BQ9NZH7 164 aa14.65□□□□□ -0.06
TRIM47-201ENST00000254816 PF4V1P10720 104 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 ZNF329Q86UD4 541 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 RNASE7Q9H1E1 156 aaKnown RBP14.64□□□□□ -0.07
TRIM47-201ENST00000254816 H3BRN7 92 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 SHANK2-AS3Q9BTD1 123 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 PRDM13Q9H4Q3 707 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 YAE1D1Q9NRH1 226 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 LY96Q9Y6Y9 160 aa14.64□□□□□ -0.07
TRIM47-201ENST00000254816 TRBV7-1A0A0A6YYK4 115 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 A0A1W2PRE2 83 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 FAM223BA6NKX1 122 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 SCGB2A1O75556 95 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 FRMD6-AS1P0C7T7 363 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 CBLN1P23435 193 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 ZNF600Q6ZNG1 722 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 FAM223AQ8IWN6 122 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 STXBP6Q8NFX7 210 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 LINC00479Q96M42 142 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 V9GYV3 84 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 CUBNO60494 3623 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms