RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CDC42EP3Q9UKI2 254 aa10.96□□□□□ -0.65
SDF2-201ENST00000247020 FOSL1P15407 271 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 OR4X2Q8NGF9 303 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 METTL26Q96S19 204 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 ELOVL1Q9BW60 279 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 SMCO4Q9NRQ5 59 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 MXRA5Q9NR99 2828 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
SDF2-201ENST00000247020 TRBV19A0A075B6N1 114 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 PPP5D1E7EU14 171 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 GGCTO75223 188 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 ZNF253O75346 499 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 CRYBB3P26998 211 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 ARL6IP6Q8N6S5 226 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 CTDSP1Q9GZU7 261 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 U3KQE9 123 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 CXorf65A6NEN9 183 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 HELTA6NFD8 242 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 BUB3O43684 328 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 S100A9P06702 114 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 RNASE1P07998 156 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 SRD5A1P18405 259 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 TAS2R60P59551 318 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 RANP62826 216 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 Q9H3A6 140 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
SDF2-201ENST00000247020 PEF1Q9UBV8 284 aaKnown RBP10.94□□□□□ -0.66
SDF2-201ENST00000247020 A0A087X0K7 114 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 PGPA6NDG6 321 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 PEX7O00628 323 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 TSPAN4O14817 238 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 AKR1C3P42330 323 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 RPL35P42766 123 aaKnown RBP10.93□□□□□ -0.66
SDF2-201ENST00000247020 MEOX2P50222 304 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 CNN1P51911 297 aaKnown RBP10.93□□□□□ -0.66
SDF2-201ENST00000247020 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 UBE2E2Q96LR5 201 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 DERL1Q9BUN8 251 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
SDF2-201ENST00000247020 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 LY6G6DO95868 133 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 IGHV3-11P01762 117 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 SLC25A5P05141 298 aaKnown RBP10.92□□□□□ -0.66
SDF2-201ENST00000247020 CD99P14209 185 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 PSG9Q00887 426 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 ADIRFQ15847 76 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 ANAPC16Q96DE5 110 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 JMJD8Q96S16 334 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 ATG101Q9BSB4 218 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
SDF2-201ENST00000247020 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 IGHV3-35A0A0C4DH35 117 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 MT-ND4LP03901 98 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 LGALS1P09382 135 aaKnown RBP10.91□□□□□ -0.66
SDF2-201ENST00000247020 GALR1P47211 349 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 HILS1P60008 231 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 TMEM88Q6PEY1 159 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 Q6ZSV7 163 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 CBLN2Q8IUK8 224 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 C15orf54Q8N8G6 183 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 WFDC12Q8WWY7 111 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 SMIM12Q96EX1 92 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
SDF2-201ENST00000247020 A0A1W2PS18 150 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 RPLP1P05386 114 aaKnown RBP10.9□□□□□ -0.66
SDF2-201ENST00000247020 ATF4P18848 351 aaPredicted RBP10.9□□□□□ -0.66
SDF2-201ENST00000247020 GNG4P50150 75 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 SIGLEC15Q6ZMC9 328 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 KLF12Q9Y4X4 402 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 MYO9AB2RTY4 2548 aa10.9□□□□□ -0.66
SDF2-201ENST00000247020 SERTM2A0A1B0GWG4 89 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 K7EMT4 169 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 PPP1R2P9O14990 202 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 TCRAP04437 139 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 CRYBA1P05813 215 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 FAM106AQ4KMX7 169 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 KLHDC1Q8N7A1 406 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 ISOC2Q96AB3 205 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 FMC1Q96HJ9 113 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 C16orf95Q9H693 158 aa10.9□□□□□ -0.67
SDF2-201ENST00000247020 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
SDF2-201ENST00000247020 RNF212Q495C1 297 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms