RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ATRAIDQ6UW56 229 aa14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 JMJD8Q96S16 334 aa14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 C20orf24Q9BUV8 137 aa14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 ZFAND3Q9H8U3 227 aa14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 PEF1Q9UBV8 284 aaKnown RBP14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 TEP1Q99973 2627 aaKnown RBP14.46□□□□□ -0.09
TNFSF9-201ENST00000245817 NDUFA4O00483 81 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 NDUFB4O95168 129 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 SNRPCP09234 159 aaKnown RBP14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 RPL7P18124 248 aaKnown RBP14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 NPPCP23582 126 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 RANP62826 216 aaKnown RBP14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 C10orf99Q6UWK7 81 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 OR8I2Q8N0Y5 310 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 SERTAD4Q9NUC0 356 aa14.46□□□□□ -0.1
TNFSF9-201ENST00000245817 SCO2A0A1W2PP80 73 aa14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 RPLP1P05386 114 aaKnown RBP14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 RNASE1P07998 156 aaKnown RBP14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 TMEM241Q24JQ0 296 aa14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 OR5B12Q96R08 314 aa14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 NAT8Q9UHE5 227 aa14.45□□□□□ -0.1
TNFSF9-201ENST00000245817 GGTLC3B5MD39 225 aa14.44□□□□□ -0.1
TNFSF9-201ENST00000245817 TRBV12-3P01733 135 aa14.44□□□□□ -0.1
TNFSF9-201ENST00000245817 PNRC1Q12796 327 aaPredicted RBP14.44□□□□□ -0.1
TNFSF9-201ENST00000245817 AWAT1Q58HT5 328 aa14.44□□□□□ -0.1
TNFSF9-201ENST00000245817 Q6ZSV7 163 aa14.44□□□□□ -0.1
TNFSF9-201ENST00000245817 NSD1Q96L73 2696 aaPredicted RBP14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 HILS1P60008 231 aa14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 RHEBQ15382 184 aa14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 KLHDC1Q8N7A1 406 aa14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 TCEAL7Q9BRU2 100 aa14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 RPS10P5Q9NQ39 176 aa14.43□□□□□ -0.1
TNFSF9-201ENST00000245817 PGPA6NDG6 321 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 CRYBB3P26998 211 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 BTN1A1Q13410 526 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 C11orf52Q96A22 123 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 SDF2L1Q9HCN8 221 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 ZNF586Q9NXT0 402 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 ZNF320A2RRD8 509 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 H3BTX0 84 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 SLC25A5P05141 298 aaKnown RBP14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 FAM106AQ4KMX7 169 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 RNF152Q8N8N0 203 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 ZNF414Q96IQ9 312 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 UBE2E2Q96LR5 201 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 GPR82Q96P67 336 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 ELOVL1Q9BW60 279 aa14.42□□□□□ -0.1
TNFSF9-201ENST00000245817 C7orf77A4D0Y5 90 aa14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 ZNF207O43670 478 aaKnown RBP14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 ATF4P18848 351 aaPredicted RBP14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 Q9H3A6 140 aa14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 FN1P02751 2386 aaKnown RBP14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 MXRA5Q9NR99 2828 aa14.41□□□□□ -0.1
TNFSF9-201ENST00000245817 TRBV19A0A075B6N1 114 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 CLPSL1A2RUU4 121 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 B4DEV8 164 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 BUB3O43684 328 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 IGLC2P0DOY2 106 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 RPEL1Q2QD12 228 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 C1orf194Q5T5A4 169 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 CMTM2Q8TAZ6 248 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 TMEM190Q8WZ59 177 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 HIST1H2BAQ96A08 127 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 DERL1Q9BUN8 251 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 OTORQ9NRC9 128 aa14.4□□□□□ -0.1
TNFSF9-201ENST00000245817 HELTA6NFD8 242 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 MRPS12O15235 138 aaKnown RBP14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 CRLF1O75462 422 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 LGALS1P09382 135 aaKnown RBP14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 GALR1P47211 349 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 PDE6HQ13956 83 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 ADIRFQ15847 76 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 MYOZ3Q8TDC0 251 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 ZNF785A8K8V0 405 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 AKR1C3P42330 323 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 C5orf17Q8NAS9 161 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 GRAMD2BQ96HH9 432 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 AAMDCQ9H7C9 122 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 EPDR1Q9UM22 224 aa14.39□□□□□ -0.11
TNFSF9-201ENST00000245817 IGHV3-66A0A0C4DH42 116 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 A0A1W2PS18 150 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 PEX7O00628 323 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 MYCNOSP40205 109 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 RPL35P42766 123 aaKnown RBP14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 CNN1P51911 297 aaKnown RBP14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 PSG9Q00887 426 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 UNQ9165/PRO28630Q6UXU0 137 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 PRELID1Q9Y255 219 aa14.38□□□□□ -0.11
TNFSF9-201ENST00000245817 CUBNO60494 3623 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 KHDC1LQ5JSQ8 128 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 GPHB5Q86YW7 130 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 C17orf77Q96MU5 243 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 C16orf95Q9H693 158 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 RPH3ALQ9UNE2 315 aa14.37□□□□□ -0.11
TNFSF9-201ENST00000245817 IGHV3OR16-13A0A075B7E8 117 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 IGHV3-49A0A0A0MS15 119 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 IGHV3-74A0A0B4J1X5 117 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 RPL23P62829 140 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms