RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
CTSD-201ENST00000236671 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 ZFP30Q9Y2G7 519 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 SIGLEC9Q9Y336 463 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 A8MWL6 223 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 P01737 135 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 LINC00614P0C842 121 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 Q56UQ5 140 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 FAM120AOSQ5T036 256 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 SSX8Q7RTT4 187 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 KIR3DL3Q8N743 410 aa12.37□□□□□ -0.43
CTSD-201ENST00000236671 GSX1Q9H4S2 264 aaPredicted RBP12.37□□□□□ -0.43
CTSD-201ENST00000236671 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
CTSD-201ENST00000236671 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 TEX22C9J3V5 150 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 DLX1P56177 255 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 ADORA2A-AS1P86434 159 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 RBPJQ06330 500 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
CTSD-201ENST00000236671 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
CTSD-201ENST00000236671 MAP1AP78559 2803 aaPredicted RBP12.36□□□□□ -0.43
CTSD-201ENST00000236671 PKDREJQ9NTG1 2253 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 NDUFB8O95169 186 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 TSPOP30536 169 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 TNFRSF14Q92956 283 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 DYNLRB1Q9NP97 96 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 E7EQL1 145 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 Q86TA4 180 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 PGLYRP4Q96LB8 373 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
CTSD-201ENST00000236671 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 C20orf202A1L168 122 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 NPIPB6E9PJ23 425 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 IGLC1P0CG04 106 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 CD24P25063 80 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 FOXA3P55318 350 aaPredicted RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 PRB3Q04118 309 aaPredicted RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 OTORQ9NRC9 128 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 CLEC5AQ9NY25 188 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 FBN2P35556 2912 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 IGHV1-3A0A0C4DH29 117 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 SH2D7A6NKC9 451 aaPredicted RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 M0QZ24 198 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 PSG1P11464 419 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 IGLL1P15814 213 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 RBPMS2Q6ZRY4 209 aaKnown RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
CTSD-201ENST00000236671 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
CTSD-201ENST00000236671 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
CTSD-201ENST00000236671 IGLV2-11P01706 119 aa12.33□□□□□ -0.44
CTSD-201ENST00000236671 LYZP61626 148 aa12.33□□□□□ -0.44
CTSD-201ENST00000236671 SLC25A39Q9BZJ4 359 aaPredicted RBP12.33□□□□□ -0.44
CTSD-201ENST00000236671 TMEM14CQ9P0S9 112 aa12.33□□□□□ -0.44
CTSD-201ENST00000236671 IGHV1-24A0A0C4DH33 117 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 FAM162BQ5T6X4 162 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 Q71RC1 249 aaPredicted RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 CHCHD1Q96BP2 118 aaKnown RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 INSIG2Q9Y5U4 225 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 ANKHD1Q8IWZ3 2542 aaKnown RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 I3L2K1 104 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 CRXO43186 299 aaPredicted RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 C16orf54Q6UWD8 224 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 CIARTQ8N365 385 aaPredicted RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 DAZAP1Q96EP5 407 aaKnown RBP12.32□□□□□ -0.44
CTSD-201ENST00000236671 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
CTSD-201ENST00000236671 OVOL3O00110 214 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 GRNP28799 593 aaKnown RBP12.31□□□□□ -0.44
CTSD-201ENST00000236671 EXOC3-AS1Q8N2X6 119 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
CTSD-201ENST00000236671 VKORC1Q9BQB6 163 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 C1RLQ9NZP8 487 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
CTSD-201ENST00000236671 J3QKU1 62 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 SIAH2O43255 324 aa12.31□□□□□ -0.44
CTSD-201ENST00000236671 APOHP02749 345 aaPredicted RBP12.31□□□□□ -0.44
CTSD-201ENST00000236671 FAM90A27PA6NNH2 459 aa12.3□□□□□ -0.44
CTSD-201ENST00000236671 COL8A1P27658 744 aa12.3□□□□□ -0.44
CTSD-201ENST00000236671 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
CTSD-201ENST00000236671 LINC00173Q6ZV60 143 aa12.3□□□□□ -0.44
CTSD-201ENST00000236671 GOLT1AQ6ZVE7 132 aa12.3□□□□□ -0.44
CTSD-201ENST00000236671 ABCA4P78363 2273 aa12.3□□□□□ -0.44
CTSD-201ENST00000236671 ZNF785A8K8V0 405 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 IGKV1-17P01599 117 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 PRNTQ86SH4 94 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 NDFIP1Q9BT67 221 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms