RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 UBE2WQ96B02 151 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 EML6Q6ZMW3 1958 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 C9JAW5 83 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 SELLP14151 372 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 ZNF329Q86UD4 541 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
APOB-201ENST00000233242 ACACBO00763 2458 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 FOXC1Q12948 553 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 OR11H6Q8NGC7 330 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 RASL10AQ92737 203 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 NEU4Q8WWR8 484 aaPredicted RBP6.76□□□□□ -1.33
APOB-201ENST00000233242 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
APOB-201ENST00000233242 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
APOB-201ENST00000233242 CD33P20138 364 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 E9PQ18 207 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 HGFACQ04756 655 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 DMRTC2Q8IXT2 367 aaPredicted RBP6.76□□□□□ -1.33
APOB-201ENST00000233242 CLEC19AQ6UXS0 136 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 LYPD6BQ8NI32 183 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 MED13Q9UHV7 2174 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 SP9P0CG40 484 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 TMEM158Q8WZ71 300 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 LIME1Q9H400 295 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 MBNL3Q9NUK0 354 aaKnown RBP6.76□□□□□ -1.33
APOB-201ENST00000233242 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 LINC01587Q99440 93 aa6.76□□□□□ -1.33
APOB-201ENST00000233242 SORL1Q92673 2214 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 IGKV1-27A0A075B6S5 117 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 NPIPB5A8MRT5 1133 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 MALP21145 153 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 PDLIM4P50479 330 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 OOSP1A8MZH6 123 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 SRRM5B3KS81 715 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 ZNF138P52744 262 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 SPG11Q96JI7 2443 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 LOC102723996A0A087X1L8 192 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 PMS2P5A8MQ11 134 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 C17orf100A8MU93 164 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 SH2D1AO60880 128 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 HIST1H4AP62805 103 aaKnown RBP6.75□□□□□ -1.33
APOB-201ENST00000233242 C9orf172C9J069 976 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 NTF4P34130 210 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 LY6G5BQ8NDX9 201 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 PNRC2Q9NPJ4 139 aaKnown RBP6.75□□□□□ -1.33
APOB-201ENST00000233242 IGHG4P01861 327 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 SHANK3Q9BYB0 1731 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 FLVCR1-AS1Q8TAF5 88 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 IGHV3-49A0A0A0MS15 119 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 IL18BPO95998 194 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 AZU1P20160 251 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 NCR2O95944 276 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 RFNGQ9Y644 331 aa6.75□□□□□ -1.33
APOB-201ENST00000233242 PRSS46E5RG02 174 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 TIMM21Q9BVV7 248 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 WDR81Q562E7 1941 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 DYSFO75923 2080 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 ZNF883P0CG24 379 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 IGHV1-2P23083 117 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 VWC2LB2RUY7 222 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 LINC00477Q96M19 166 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 SIGLEC15Q6ZMC9 328 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 C9orf139Q6ZV77 190 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 C1QTNF4Q9BXJ3 329 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 IGHV3-66A0A0C4DH42 116 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 ZNF688P0C7X2 276 aa6.74□□□□□ -1.33
APOB-201ENST00000233242 WIPF2Q8TF74 440 aaPredicted RBP6.74□□□□□ -1.33
APOB-201ENST00000233242 NAV3Q8IVL0 2385 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 TRACP01848 142 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 STPG4Q8N801 248 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 TFF2Q03403 129 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 Q8N8P6 123 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 ANKHD1Q8IWZ3 2542 aaKnown RBP6.73□□□□□ -1.33
APOB-201ENST00000233242 IGKV3-20P01619 116 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 CELA3BP08861 270 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 EXOC3-AS1Q8N2X6 119 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 SHANK2-AS3Q9BTD1 123 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 IGLL1P15814 213 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 VGLL1Q99990 258 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 VDAC2P45880 294 aaPredicted RBP6.73□□□□□ -1.33
APOB-201ENST00000233242 LINC00158P58513 81 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 GAGE5Q13069 117 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 GAGE6Q13070 117 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 GAGE2AQ6NT46 116 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 FAM208BQ5VWN6 2430 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms