RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 MAJINQ3KP22 176 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 Q56UQ5 140 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 RNASEKQ6P5S7 137 aaKnown RBP16.41■□□□□ 0.22
SNX3-201ENST00000230085 PDPNQ86YL7 162 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 LINC00311Q8N616 119 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 GATD1Q8NB37 220 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 RNASE8Q8TDE3 154 aaKnown RBP16.41■□□□□ 0.22
SNX3-201ENST00000230085 PERPQ96FX8 193 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 MS4A6AQ9H2W1 248 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 NAV2Q8IVL1 2488 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 SYS1-DBNDD2H3BUS1 97 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 NDUFS7O75251 213 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 PLP1P60201 277 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 C16orf54Q6UWD8 224 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 PET117Q6UWS5 81 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 ZNF841Q6ZN19 808 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 HARBI1Q96MB7 349 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 GSX1Q9H4S2 264 aaPredicted RBP16.41■□□□□ 0.22
SNX3-201ENST00000230085 FNDC4Q9H6D8 234 aaPredicted RBP16.41■□□□□ 0.22
SNX3-201ENST00000230085 SPRY3O43610 288 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 PYYP10082 97 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 ETFRF1Q6IPR1 90 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 C5orf17Q8NAS9 161 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 OR10W1Q8NGF6 305 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 OR2T6Q8NHC8 308 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 TRGV9Q99603 122 aa16.4■□□□□ 0.22
SNX3-201ENST00000230085 OR4C46A6NHA9 309 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 CGB1A6NKQ9 187 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 C17orf100A8MU93 164 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 ZNF137PP52743 207 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 FOXA3P55318 350 aaPredicted RBP16.39■□□□□ 0.21
SNX3-201ENST00000230085 ATOH7Q8N100 152 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 OR4C13Q8NGP0 309 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
SNX3-201ENST00000230085 PPBPP02775 128 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 LIPFP07098 398 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 C12orf54Q6X4T0 127 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 RBPMS2Q6ZRY4 209 aaKnown RBP16.38■□□□□ 0.21
SNX3-201ENST00000230085 SPATA12Q7Z6I5 190 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 TMEM191AQ9H0A3 160 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 TRAV34A0A0B4J273 112 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 CYSRT1A8MQ03 144 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 LY6HO94772 140 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 IGHV1-46P01743 117 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 GNG10P50151 68 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 CCL8P80075 99 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 WT1-ASQ06250 92 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 DEFB113Q30KQ7 82 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 DEFB125Q8N687 156 aa16.38■□□□□ 0.21
SNX3-201ENST00000230085 MRPL20Q9BYC9 149 aaKnown RBP16.38■□□□□ 0.21
SNX3-201ENST00000230085 IGHV1-24A0A0C4DH33 117 aa16.37■□□□□ 0.21
SNX3-201ENST00000230085 FLYWCH2Q96CP2 140 aaKnown RBP16.37■□□□□ 0.21
SNX3-201ENST00000230085 RAB1BQ9H0U4 201 aa16.37■□□□□ 0.21
SNX3-201ENST00000230085 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
SNX3-201ENST00000230085 LINC00305Q7Z4B0 112 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 LOC102724200A0A096LPH7 203 aaPredicted RBP16.36■□□□□ 0.21
SNX3-201ENST00000230085 HAX1O00165 279 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 IGLV2-23P01705 113 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 SLC25A34Q6PIV7 304 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 GTSF1Q8WW33 167 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 DPF1Q92782 380 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 TMEM186Q96B77 213 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 PMCHL2Q9BQD1 86 aa16.36■□□□□ 0.21
SNX3-201ENST00000230085 BEX4Q9NWD9 120 aaPredicted RBP16.36■□□□□ 0.21
SNX3-201ENST00000230085 AKAP9Q99996 3911 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 LEPROTL1O95214 131 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 IGHV4-39P01824 125 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 GP9P14770 177 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 ATP5J2P56134 94 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 SSBP2P81877 361 aaPredicted RBP16.35■□□□□ 0.21
SNX3-201ENST00000230085 TNFAIP6P98066 277 aaPredicted RBP16.35■□□□□ 0.21
SNX3-201ENST00000230085 BVES-AS1Q5T3Y7 98 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 DUX4L9Q6RFH8 374 aaPredicted RBP16.35■□□□□ 0.21
SNX3-201ENST00000230085 KIR3DL3Q8N743 410 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 SSBP4Q9BWG4 385 aaPredicted RBP16.35■□□□□ 0.21
SNX3-201ENST00000230085 SCRT2Q9NQ03 307 aa16.35■□□□□ 0.21
SNX3-201ENST00000230085 MAP1AP78559 2803 aaPredicted RBP16.35■□□□□ 0.21
SNX3-201ENST00000230085 CCDC168Q8NDH2 2452 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 CORTO00230 105 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 TAX1BP3O14907 124 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 MOSP00540 346 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 P01737 135 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 APOHP02749 345 aaPredicted RBP16.34■□□□□ 0.21
SNX3-201ENST00000230085 SLC25A5P05141 298 aaKnown RBP16.34■□□□□ 0.21
SNX3-201ENST00000230085 GPR6P46095 362 aaPredicted RBP16.34■□□□□ 0.21
SNX3-201ENST00000230085 CAMPP49913 170 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 TMEM116Q8NCL8 245 aa16.34■□□□□ 0.21
SNX3-201ENST00000230085 A0A1B0GW15 77 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 NBEAP1P0C6P0 100 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 H1FXQ92522 213 aaKnown RBP16.33■□□□□ 0.21
SNX3-201ENST00000230085 ST6GALNAC6Q969X2 333 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 CCL13Q99616 98 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 TMEM14CQ9P0S9 112 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 HSPB8Q9UJY1 196 aa16.33■□□□□ 0.21
SNX3-201ENST00000230085 E7EUB6 86 aa16.33■□□□□ 0.2
SNX3-201ENST00000230085 TCRAP04437 139 aa16.33■□□□□ 0.2
SNX3-201ENST00000230085 EFNA4P52798 201 aa16.33■□□□□ 0.2
SNX3-201ENST00000230085 FAM201AQ5SY85 155 aa16.33■□□□□ 0.2
SNX3-201ENST00000230085 LINC01545Q5VT33 79 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms