RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 VAMP2P63027 116 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 ZNF767PQ75MW2 155 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 C12orf45Q8N5I9 185 aaPredicted RBP10.27□□□□□ -0.77
GPN3-201ENST00000228827 C2CD4CQ8TF44 421 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 UHRF2Q96PU4 802 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 HRH4Q9H3N8 390 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 RPRMQ9NS64 109 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 CELA1Q9UNI1 258 aa10.27□□□□□ -0.77
GPN3-201ENST00000228827 FAM240BA0A1B0GVZ2 78 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 IGLL5B9A064 214 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 Q6ZTC4 211 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 GPR82Q96P67 336 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 ARL6Q9H0F7 186 aa10.26□□□□□ -0.77
GPN3-201ENST00000228827 A0A0J9YX75 114 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 K7EPK0 472 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 BCAP31P51572 246 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 SELENOTP62341 195 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 PSG9Q00887 426 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 RNF182Q8N6D2 247 aa10.25□□□□□ -0.77
GPN3-201ENST00000228827 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 DEDDO75618 318 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 CAV2P51636 162 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 EMP1P54849 157 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 AGRNO00468 2067 aa10.24□□□□□ -0.77
GPN3-201ENST00000228827 FAM24AA6NFZ4 105 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 GOSR2O14653 212 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 AGPAT2O15120 278 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 CST7O76096 145 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 PLP1P60201 277 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 S100A10P60903 97 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 LGALS9CQ6DKI2 356 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 MZT2BQ6NZ67 158 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 ZNF705AQ6ZN79 300 aaPredicted RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 RPP25LQ8N5L8 163 aaKnown RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 S100ZQ8WXG8 99 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 C2orf50Q96LR7 162 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 ARV1Q9H2C2 271 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 TRAV10A0A0B4J240 114 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 PRB4P10163 310 aaPredicted RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 RPL7P18124 248 aaKnown RBP10.23□□□□□ -0.77
GPN3-201ENST00000228827 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 ZNF546Q86UE3 836 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 MGST2Q99735 147 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 GGACTQ9BVM4 153 aa10.23□□□□□ -0.77
GPN3-201ENST00000228827 SNRPCP09234 159 aaKnown RBP10.22□□□□□ -0.77
GPN3-201ENST00000228827 ASAH1Q13510 395 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 LINC00299Q6ZSB3 139 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 S100A7AQ86SG5 101 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 ZNF738Q8NE65 137 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 LRRC20Q8TCA0 184 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 NEU1Q99519 415 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 C11orf1Q9H5F2 150 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 BATF3Q9NR55 127 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
GPN3-201ENST00000228827 COX7A2P2O60397 106 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 PVALBP20472 110 aaPredicted RBP10.21□□□□□ -0.78
GPN3-201ENST00000228827 CNN1P51911 297 aaKnown RBP10.21□□□□□ -0.78
GPN3-201ENST00000228827 RAB32Q13637 225 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 ENKURQ8TC29 256 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 APLNQ9ULZ1 77 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 GOLT1BQ9Y3E0 138 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 RFNGQ9Y644 331 aa10.21□□□□□ -0.78
GPN3-201ENST00000228827 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 A6NHS1 94 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 M0R2Z0 102 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
GPN3-201ENST00000228827 CAMLGP49069 296 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 PXDC1Q5TGL8 231 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
GPN3-201ENST00000228827 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 A0A087X0K7 114 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 IGSF23A1L1A6 192 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 A8MTW9 85 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
GPN3-201ENST00000228827 UPK1BO75841 260 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 HBE1P02100 147 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 CXCL3P19876 107 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 TCTAP57738 103 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 PRR20EP86478 221 aa10.19□□□□□ -0.78
GPN3-201ENST00000228827 PRR20CP86479 221 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms