RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 C9orf118A6NHY6 69 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 SRRM5B3KS81 715 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 HSD52Q0P140 79 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 C2orf83Q53S99 150 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 LINC00322Q6ZN03 302 aaPredicted RBP11.76□□□□□ -0.53
PRDM4-201ENST00000228437 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
PRDM4-201ENST00000228437 IGF2BP2-AS1Q96M15 143 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
PRDM4-201ENST00000228437 PPBPP02775 128 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 IL4P05112 153 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 SRSF9Q13242 221 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRDM4-201ENST00000228437 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 C9orf106Q8NAJ2 232 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 FAM90A9PA6NNJ1 464 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 CD40P25942 277 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 DEFB109BQ30KR1 87 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 FBXL15Q9H469 300 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 C1RLQ9NZP8 487 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
PRDM4-201ENST00000228437 PIEZO2Q9H5I5 2752 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 VSTM5A8MXK1 200 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 H7C2G1 150 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 NKX2-8O15522 239 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 OR5AN1Q8NGI8 311 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 RPEQ96AT9 228 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 NDUFA3O95167 84 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 LEPP41159 167 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 RHOGP84095 191 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 FAM106AQ4KMX7 169 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 LYZL1Q6UWQ5 148 aa11.74□□□□□ -0.53
PRDM4-201ENST00000228437 NCBP2LA6PVI3 153 aaKnown RBP11.73□□□□□ -0.53
PRDM4-201ENST00000228437 TMPRSS3P57727 454 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 LOXL3P58215 753 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 WT1-ASQ06250 92 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 ZNF502Q8TBZ5 544 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 TPSG1Q9NRR2 321 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 IGHV1-18A0A0C4DH31 117 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 E7EUB6 86 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
PRDM4-201ENST00000228437 HBDP02042 147 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 FXYD5Q96DB9 178 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
PRDM4-201ENST00000228437 NPIPB5A8MRT5 1133 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 C21orf140B9A014 251 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 K7EP34 96 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
PRDM4-201ENST00000228437 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 PSG8Q9UQ74 426 aa11.73□□□□□ -0.53
PRDM4-201ENST00000228437 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 Q8TAT8 98 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 DKK2Q9UBU2 259 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 MUC6Q6W4X9 2439 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
PRDM4-201ENST00000228437 C9orf172C9J069 976 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 FAM167A-AS1Q96KT0 104 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
PRDM4-201ENST00000228437 MAP1LC3AQ9H492 121 aa11.72□□□□□ -0.53
PRDM4-201ENST00000228437 VWC2LB2RUY7 222 aa11.71□□□□□ -0.53
PRDM4-201ENST00000228437 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.53
PRDM4-201ENST00000228437 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.53
PRDM4-201ENST00000228437 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
PRDM4-201ENST00000228437 MYOZ3Q8TDC0 251 aa11.71□□□□□ -0.53
PRDM4-201ENST00000228437 ZNF747Q9BV97 191 aa11.71□□□□□ -0.53
PRDM4-201ENST00000228437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.537e-6■□□□□ 9.3
PRDM4-201ENST00000228437 IGHV3-66A0A0C4DH42 116 aa11.71□□□□□ -0.53
PRDM4-201ENST00000228437 SOX21Q9Y651 276 aaPredicted RBP11.71□□□□□ -0.53
PRDM4-201ENST00000228437 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 H3BRM9 83 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 WISP2O76076 250 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 APOMO95445 188 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 CKS1BP61024 79 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 C17orf58Q2M2W7 97 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 C17orf77Q96MU5 243 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.54
PRDM4-201ENST00000228437 TRANK1O15050 2925 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 H3BMG7 143 aa11.71□□□□□ -0.54
PRDM4-201ENST00000228437 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.54
PRDM4-201ENST00000228437 J3QW42 95 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 TRIP6Q15654 476 aaKnown RBP11.7□□□□□ -0.54
PRDM4-201ENST00000228437 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 ARPC1AQ92747 370 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 A0A1W2PPM0 123 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms