RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MPDU1O75352 247 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 B2MP61769 119 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 PXDC1Q5TGL8 231 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 LINC00305Q7Z4B0 112 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
SUPT4H1-201ENST00000225504 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.7
SUPT4H1-201ENST00000225504 Q6ZRG5 221 aa10.65□□□□□ -0.7
SUPT4H1-201ENST00000225504 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
SUPT4H1-201ENST00000225504 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 SOCS3O14543 225 aa10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 SNRPCP09234 159 aaKnown RBP10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 DEFB1P60022 68 aa10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
SUPT4H1-201ENST00000225504 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 KNCNA6PVL3 124 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 IFNA5P01569 189 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 GALR1P47211 349 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 PSMG4Q5JS54 123 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 AGRNO00468 2067 aa10.63□□□□□ -0.71
SUPT4H1-201ENST00000225504 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 NHLRC4P0CG21 123 aaPredicted RBP10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 SPATA31B1PQ5VZV4 182 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 ZNF709Q8N972 641 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 RETNQ9HD89 108 aa10.62□□□□□ -0.71
SUPT4H1-201ENST00000225504 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 S100A7P31151 101 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 INO80EQ8NBZ0 244 aaPredicted RBP10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 OR1L4Q8NGR5 311 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 LINC00052Q96N35 136 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 GPR82Q96P67 336 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 hCG_2014768A0A024R1R8 64 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 H3BTX0 84 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 ARPC5O15511 151 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 GATAD1Q8WUU5 269 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 ST6GAL2Q96JF0 529 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 PFDN5Q99471 154 aa10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 PARD6GQ9BYG4 376 aaPredicted RBP10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 SEPSECSQ9HD40 501 aaKnown RBP10.61□□□□□ -0.71
SUPT4H1-201ENST00000225504 C17orf112F2Z3M2 114 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 H3BQ15 152 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 PRB4P10163 310 aaPredicted RBP10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 ATF4P18848 351 aaPredicted RBP10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 FFAR4Q5NUL3 377 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 MIR17HGQ75NE6 70 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 S100A7AQ86SG5 101 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
SUPT4H1-201ENST00000225504 A0A087X0K7 114 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 A0A1B0GVG6 124 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 F6UB75 175 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 ISLRO14498 428 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 EIF3GO75821 320 aaKnown RBP eCLIP10.59□□□□□ -0.717e-8■■■■■ 36.4
SUPT4H1-201ENST00000225504 ID1P41134 155 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 PSMB3P49720 205 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 FAM78BQ5VT40 261 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 RPL7L1Q6DKI1 246 aaKnown RBP10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 RNF182Q8N6D2 247 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 HSD17B11Q8NBQ5 300 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 MFFQ9GZY8 342 aa10.59□□□□□ -0.71
SUPT4H1-201ENST00000225504 MEOX2P50222 304 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 STHQ8IWL8 128 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 FAM167A-AS1Q96KT0 104 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 U3KQK5 164 aa10.58□□□□□ -0.72
SUPT4H1-201ENST00000225504 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 SLC17A3O00476 420 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 IGLC2P0DOY2 106 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 PYYP10082 97 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 CYTL1Q9NRR1 136 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 KCNIP2Q9NS61 270 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF586Q9NXT0 402 aa10.57□□□□□ -0.72
SUPT4H1-201ENST00000225504 KIR2DL5BA0A0G2JN68 375 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 KIR2DL5BA0A0G2JPC4 375 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 H3BMM0 161 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 GIG44P09565 113 aaPredicted RBP10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 CXCL2P19875 107 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF266Q14584 549 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 KIR2DL5AQ8N109 375 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms