RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 MRPS18CQ9Y3D5 142 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 DIDO1Q9BTC0 2240 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 PYY3Q5JQD4 70 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 TPTE2P1Q5T6R2 138 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 Q6P435 159 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 MBD3L1Q8WWY6 194 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 CYYR1Q96J86 154 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 C3orf79P0CE67 100 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 ATP5IP56385 69 aaPredicted RBP11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 Q6AWC8 147 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 SPTBN2O15020 2390 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 TRPM7Q96QT4 1865 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 M0R2P5 195 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 DKK1O94907 266 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 SPXQ9BT56 116 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 CRPP02741 224 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 STAG3L3P0CL85 134 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 ZNF48Q96MX3 618 aaPredicted RBP11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 GTSF1LQ9H1H1 148 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 SBF1O95248 1867 aa11.09□□□□□ -0.63
TGFBR3-201ENST00000212355 IGLV3-32A0A0A0MS00 114 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 ASCL4Q6XD76 172 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 NTN3O00634 580 aaPredicted RBP11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 ZSWIM8A7E2V4 1837 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 ZNF524Q96C55 264 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 PAX4O43316 350 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 CFHR2P36980 270 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 QRFPP83859 136 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 C1orf159Q96HA4 380 aa11.08□□□□□ -0.64
TGFBR3-201ENST00000212355 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 CST9LQ9H4G1 147 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 A0A1B0GW15 77 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 SRRM5B3KS81 715 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 CHCHD1Q96BP2 118 aaKnown RBP11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 TRAV8-3A0A0A6YYJ7 113 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 DOCK10Q96BY6 2186 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 TNFSF13O75888 250 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 OR2K2Q8NGT1 345 aa11.07□□□□□ -0.64
TGFBR3-201ENST00000212355 SLC25A20O43772 301 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 SIGMAR1Q99720 223 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 EREGO14944 169 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 ZNF883P0CG24 379 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 PSG3Q16557 428 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 KLHL30-AS1Q8NEE0 82 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 VGLL1Q99990 258 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 MPZP25189 248 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 ZNF124Q15973 351 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
TGFBR3-201ENST00000212355 IGHV3-38A0A0C4DH36 116 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 PRB1P04280 392 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 SPRY2O43597 315 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 SYNJ2BPP57105 145 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 IL17RELQ6ZVW7 336 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 TICRRQ7Z2Z1 1910 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 A8MWV9 139 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 B3GALT5-AS1P59052 145 aa11.05□□□□□ -0.64
TGFBR3-201ENST00000212355 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 FBLN5Q9UBX5 448 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 A0A096LPF7 62 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 A0A1B0GWJ7 208 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 SIGLEC9Q9Y336 463 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
TGFBR3-201ENST00000212355 PLNP26678 52 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 MGAMO43451 1857 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms