RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZNF738Q8NE65 137 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 COL5A1P20908 1838 aaPredicted RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 IGHV1-3A0A0C4DH29 117 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 SMIM17P0DL12 118 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 IL17RELQ6ZVW7 336 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 FAM169BQ8N8A8 192 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 MAP1LC3CQ9BXW4 147 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 TMEM191AQ9H0A3 160 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 NBR2O15453 112 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 PAFAH1B2P68402 229 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 Q8NFD4 153 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 ARPC1AQ92747 370 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 FOLR2P14207 255 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 Q8TAT8 98 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 OR4B1Q8NGF8 309 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 NRN1Q9NPD7 142 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 BET1LQ9NYM9 111 aa9.72□□□□□ -0.85
CHPF2-201ENST00000035307 TCF21O43680 179 aa9.71□□□□□ -0.85
CHPF2-201ENST00000035307 HLA-DRB1P01911 266 aa9.71□□□□□ -0.85
CHPF2-201ENST00000035307 WT1-ASQ06250 92 aa9.71□□□□□ -0.85
CHPF2-201ENST00000035307 EPDR1Q9UM22 224 aa9.71□□□□□ -0.85
CHPF2-201ENST00000035307 IGLV2-14P01704 120 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 VDAC2P45880 294 aaPredicted RBP9.71□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 GPR82Q96P67 336 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 PRORYQ9H606 182 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 HBBP68871 147 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 NUDT10Q8NFP7 164 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 RNASEH2CQ8TDP1 164 aaKnown RBP9.71□□□□□ -0.86
CHPF2-201ENST00000035307 RNF125Q96EQ8 232 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 NUDT11Q96G61 164 aa9.71□□□□□ -0.86
CHPF2-201ENST00000035307 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.86
CHPF2-201ENST00000035307 TRGV3P03979 118 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 FAM162BQ5T6X4 162 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 DMRTC2Q8IXT2 367 aaPredicted RBP9.7□□□□□ -0.86
CHPF2-201ENST00000035307 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 C2orf83Q53S99 150 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM116Q8NCL8 245 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 VPS25Q9BRG1 176 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 IGKV2-40A0A087WW87 121 aaPredicted RBP9.7□□□□□ -0.86
CHPF2-201ENST00000035307 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 IGKV2D-40P01614 121 aaPredicted RBP9.7□□□□□ -0.86
CHPF2-201ENST00000035307 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
CHPF2-201ENST00000035307 C19orf24Q9BVV8 132 aa9.7□□□□□ -0.86
CHPF2-201ENST00000035307 A0A1B0GW64 132 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 M0R381 172 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 COX19Q49B96 90 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
CHPF2-201ENST00000035307 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 KMT2EQ8IZD2 1858 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 IGHV2-5P01817 119 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 RPL7P18124 248 aaKnown RBP9.69□□□□□ -0.86
CHPF2-201ENST00000035307 NDPQ00604 133 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 Q8TCH9 128 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 RITA1Q96K30 269 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 Q6ZSR3 168 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 ZNF329Q86UD4 541 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 METTL26Q96S19 204 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM208Q9BTX3 173 aa9.69□□□□□ -0.86
CHPF2-201ENST00000035307 RPP21Q9H633 154 aaKnown RBP9.69□□□□□ -0.86
CHPF2-201ENST00000035307 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
CHPF2-201ENST00000035307 GATA4P43694 442 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 PROP1O75360 226 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 CX3CL1P78423 397 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 RHOGP84095 191 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 JOSD1Q15040 202 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-201ENST00000035307 ZNF124Q15973 351 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM167AQ8TBQ9 72 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 A0A1W2PPR1 153 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 APOHP02749 345 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-201ENST00000035307 SAA4P35542 130 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-201ENST00000035307 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 GRAMD2BQ96HH9 432 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 ZNF257Q9Y2Q1 563 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 GOLT1BQ9Y3E0 138 aa9.68□□□□□ -0.86
CHPF2-201ENST00000035307 NPPCP23582 126 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 MORN5Q5VZ52 161 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
CHPF2-201ENST00000035307 DSCAML1Q8TD84 2053 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 TMEM30BQ3MIR4 351 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 DPF1Q92782 380 aa9.67□□□□□ -0.86
CHPF2-201ENST00000035307 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms