RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
ERCC1-201ENST00000013807 GATA2P23769 480 aaPredicted RBP11.26□□□□□ -0.61
ERCC1-201ENST00000013807 EMP1P54849 157 aa11.26□□□□□ -0.61
ERCC1-201ENST00000013807 TMEM147Q9BVK8 224 aa11.26□□□□□ -0.61
ERCC1-201ENST00000013807 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
ERCC1-201ENST00000013807 PAIP2BQ9ULR5 123 aaKnown RBP11.26□□□□□ -0.61
ERCC1-201ENST00000013807 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
ERCC1-201ENST00000013807 TRAV8-2A0A0B4J237 113 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 C9orf170A2RU37 121 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 H3BRN7 92 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
ERCC1-201ENST00000013807 IFNA21P01568 189 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 ORM2P19652 201 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 TSPOP30536 169 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 B2MP61769 119 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 SELENOTP62341 195 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 GSG1LQ6UXU4 331 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 SMIM8Q96KF7 97 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 C7orf50Q9BRJ6 194 aaKnown RBP11.25□□□□□ -0.61
ERCC1-201ENST00000013807 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
ERCC1-201ENST00000013807 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
ERCC1-201ENST00000013807 NAP1L6A6NFF2 107 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 K7EPK0 472 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
ERCC1-201ENST00000013807 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
ERCC1-201ENST00000013807 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
ERCC1-201ENST00000013807 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 C4orf46Q504U0 113 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 CYP2G1PQ6ZSU1 146 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 SRRQ9GZT4 340 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
ERCC1-201ENST00000013807 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
ERCC1-201ENST00000013807 PRSS29PA6NIE9 313 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 H3BP45 60 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 ADAP1O75689 374 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 NDUFB6O95139 128 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 POLR2GP62487 172 aaKnown RBP eCLIP11.23□□□□□ -0.61
ERCC1-201ENST00000013807 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
ERCC1-201ENST00000013807 A0A087X0K7 114 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 HYPMO75409 117 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 IL5P05113 134 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 MED14OSP0DP75 135 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 FAM3BP58499 235 aaPredicted RBP11.22□□□□□ -0.61
ERCC1-201ENST00000013807 DLK1P80370 383 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 SPANXN2Q5MJ10 180 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 NPVFQ9HCQ7 196 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 HIGD1AQ9Y241 93 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 PCLOQ9Y6V0 5065 aa11.22□□□□□ -0.61
ERCC1-201ENST00000013807 PLAC8L1A1L4L8 177 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 OR4E1P0C645 316 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 CXCL3P19876 107 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 TAS2R30P59541 319 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 RAP2BP61225 183 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 DAD1P61803 113 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 S100A7AQ86SG5 101 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
ERCC1-201ENST00000013807 M0R2N4 97 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
ERCC1-201ENST00000013807 INSP01308 110 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 LINC00869P0C866 280 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 BAK1Q16611 211 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 TMEM88Q6PEY1 159 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 TMEM208Q9BTX3 173 aa11.2□□□□□ -0.62
ERCC1-201ENST00000013807 M0R2Z0 102 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 TSC22D2O75157 780 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 PSG3Q16557 428 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 CNPY1Q3B7I2 92 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 OR10P1Q8NGE3 313 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
ERCC1-201ENST00000013807 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
ERCC1-201ENST00000013807 ZNF705GA8MUZ8 300 aaPredicted RBP11.18□□□□□ -0.62
ERCC1-201ENST00000013807 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 SSSCA1O60232 199 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 PRM2P04554 102 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 CXCL2P19875 107 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 BTCP35070 178 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
ERCC1-201ENST00000013807 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 CCDC160A6NGH7 325 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 CCNKO75909 580 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 OR5G3P0C626 314 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 METTL15P1P0C7V9 234 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 HTN3P15516 51 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 TAS2R60P59551 318 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 FGL1Q08830 312 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms