RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PPBPP02775 128 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 TMEM249Q2WGJ8 235 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 SPATA31B1PQ5VZV4 182 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 ERASQ7Z444 233 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 LINC00518Q8N0U6 118 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 OR9G4Q8NGQ1 327 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 SEPSECSQ9HD40 501 aaKnown RBP8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 NDUFA4L2Q9NRX3 87 aa8.34□□□□□ -1.07
NIPAL3-201ENST00000003912 COL4A4P53420 1690 aaPredicted RBP8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 IGHV4-61A0A0C4DH41 118 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 TCRAP04437 139 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 FBXL19-AS1Q494R0 122 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 VGLL1Q99990 258 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 IGHV4-30-2A0A087WSY4 118 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 IGHV4-39P01824 125 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 AMBPP02760 352 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 MALP21145 153 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 IFI27P40305 119 aaPredicted RBP8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 C8orf31Q8N9H6 132 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 Q8NA96 180 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 SHANK2-AS3Q9BTD1 123 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 MPDZO75970 2070 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 A0A0G2JRQ6 117 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 H3BVH4 76 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 PPIFP30405 207 aaKnown RBP8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 DEFB131AP59861 70 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 TRAV12-3A0A0B4J271 114 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 OR11H1Q8NG94 326 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 OR11H2Q8NH07 326 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
NIPAL3-201ENST00000003912 DOCK7Q96N67 2140 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 HEATR5AQ86XA9 2040 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 ZGRF1Q86YA3 2104 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 PSG3Q16557 428 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 Q6ZRM9 215 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 PDE6HQ13956 83 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 UBE2E2Q96LR5 201 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 SEM1Q6ZVN7 128 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 OCC1Q8TAD7 63 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 AGMATQ9BSE5 352 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 CTSZQ9UBR2 303 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 ANAPC10Q9UM13 185 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 DENND4CQ5VZ89 1909 aa8.32□□□□□ -1.08
NIPAL3-201ENST00000003912 H3BUA1 57 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 NDUFA4O00483 81 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 VCX2Q9H322 139 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 FXYD7P58549 80 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 FAM208BQ5VWN6 2430 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 MMP23AO75900 390 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 A0A087WX48 190 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 PKIAP61925 76 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 DNLZQ5SXM8 178 aa8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 RPP25LQ8N5L8 163 aaKnown RBP8.31□□□□□ -1.08
NIPAL3-201ENST00000003912 HOXA5P20719 270 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 MLANAQ16655 118 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 LBHQ53QV2 105 aaPredicted RBP8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 C1orf194Q5T5A4 169 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 C11orf53Q8IXP5 236 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 IGHV4-59P01825 116 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 GTF3C1Q12789 2109 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 FAM120AOSQ5T036 256 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 IMMP2LQ96T52 175 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 CYSLTR1Q9Y271 337 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 H7C2G1 150 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 LHBP01229 141 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 OR11H6Q8NGC7 330 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 FOXC2Q99958 501 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 KIAA2026Q5HYC2 2103 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
NIPAL3-201ENST00000003912 MST1LQ2TV78 715 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms