RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 MTFR1Q15390 333 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 HHIPL2Q6UWX4 724 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 PRO3102Q9H379 93 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 ZNF112Q9UJU3 913 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 KCNH4Q9UQ05 1017 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 SUGT1Q9Y2Z0 365 aa10.84□□□□□ -0.67
LINC00339-212ENST00000642072 ATRNL1Q5VV63 1379 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 BCAMP50895 628 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 SLC4A10Q6U841 1118 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-212ENST00000642072 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
LINC00339-212ENST00000642072 WDHD1O75717 1129 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-212ENST00000642072 OSBPP22059 807 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 PSMC4P43686 418 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 KIF22Q14807 665 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 CAVIN4Q5BKX8 364 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 METTL24Q5JXM2 366 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 DCAF15Q66K64 600 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 MIGA2Q7L4E1 593 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 HOOK2Q96ED9 719 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 ZNF341Q9BYN7 854 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 CPA4Q9UI42 421 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-212ENST00000642072 MAST3O60307 1309 aa10.82□□□□□ -0.68
LINC00339-212ENST00000642072 PDHXO00330 501 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 GJB1P08034 283 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 BCRP11274 1271 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 GJA8P48165 433 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-212ENST00000642072 NFIAQ12857 509 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 PUM3Q15397 648 aaKnown RBP10.81□□□□□ -0.68
LINC00339-212ENST00000642072 NOL9Q5SY16 702 aaKnown RBP10.81□□□□□ -0.68
LINC00339-212ENST00000642072 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
LINC00339-212ENST00000642072 DAGLAQ9Y4D2 1042 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 ZNF521Q96K83 1311 aa10.81□□□□□ -0.68
LINC00339-212ENST00000642072 RFX7Q2KHR2 1363 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-212ENST00000642072 GRK4P32298 578 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 CDC42EP5Q6NZY7 148 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 LAMA2P24043 3122 aaKnown RBP10.8□□□□□ -0.68
LINC00339-212ENST00000642072 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
LINC00339-212ENST00000642072 UNC80Q8N2C7 3258 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 PHF20L1A8MW92 1017 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-212ENST00000642072 CCL5P13501 91 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 PRKCZQ05513 592 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 ZFPM1Q8IX07 1006 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
LINC00339-212ENST00000642072 NKX2-3Q8TAU0 364 aa10.79□□□□□ -0.68
LINC00339-212ENST00000642072 EYA2O00167 538 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 CXCL11O14625 94 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 FMNL1O95466 1100 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-212ENST00000642072 IFIT1P09914 478 aaKnown RBP10.78□□□□□ -0.68
LINC00339-212ENST00000642072 CYP2C8P10632 490 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 PRDX5P30044 214 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 WDR66Q8TBY9 1149 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 LPIN2Q92539 896 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
LINC00339-212ENST00000642072 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
LINC00339-212ENST00000642072 A0A0G2JLL6 359 aaPredicted RBP10.77□□□□□ -0.69
LINC00339-212ENST00000642072 ZBTB7BO15156 539 aaPredicted RBP10.77□□□□□ -0.69
LINC00339-212ENST00000642072 ZBTB22O15209 634 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 HOXD10P28358 340 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 MAP3K10Q02779 954 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 TCP10Q12799 353 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 SH3BP5LQ7L8J4 393 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 PRRT2Q7Z6L0 340 aaPredicted RBP10.77□□□□□ -0.69
LINC00339-212ENST00000642072 U2AF1L4Q8WU68 220 aaKnown RBP10.77□□□□□ -0.69
LINC00339-212ENST00000642072 DPF3Q92784 378 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 RNF208Q9H0X6 261 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 PTPRCP08575 1304 aa10.77□□□□□ -0.69
LINC00339-212ENST00000642072 FCGRTP55899 365 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 SCYL3Q8IZE3 742 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 HTATIP2Q9BUP3 242 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 IDI2Q9BXS1 227 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 SLC45A1Q9Y2W3 748 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 GAKO14976 1311 aa10.76□□□□□ -0.69
LINC00339-212ENST00000642072 MGAMO43451 1857 aa10.75□□□□□ -0.69
LINC00339-212ENST00000642072 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-212ENST00000642072 SGPL1O95470 568 aa10.75□□□□□ -0.69
LINC00339-212ENST00000642072 SLURP2P0DP57 97 aa10.75□□□□□ -0.69
LINC00339-212ENST00000642072 SLC5A1P13866 664 aa10.75□□□□□ -0.69
LINC00339-212ENST00000642072 PTPRAP18433 802 aa10.75□□□□□ -0.69
LINC00339-212ENST00000642072 IRF5Q13568 498 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms