RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
PHGDH-222ENST00000641587 PPIL2Q13356 520 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 RABL6Q3YEC7 729 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-222ENST00000641587 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-222ENST00000641587 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 ZDHHC15Q96MV8 337 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 UTYO14607 1347 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 PDE8BO95263 885 aa12.55□□□□□ -0.4
PHGDH-222ENST00000641587 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
PHGDH-222ENST00000641587 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
PHGDH-222ENST00000641587 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
PHGDH-222ENST00000641587 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
PHGDH-222ENST00000641587 RPAP1Q9BWH6 1393 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-222ENST00000641587 FGFR2P21802 821 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 TCP10Q12799 353 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 KIF22Q14807 665 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 ZCCHC17Q9NP64 241 aaKnown RBP12.54□□□□□ -0.4
PHGDH-222ENST00000641587 ADGRA2Q96PE1 1338 aa12.54□□□□□ -0.4
PHGDH-222ENST00000641587 OSBPP22059 807 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 PSMC4P43686 418 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 NFIAQ12857 509 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 MOGSQ13724 837 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 DCAF15Q66K64 600 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
PHGDH-222ENST00000641587 SRRDQ9UH36 339 aa12.53□□□□□ -0.4
PHGDH-222ENST00000641587 PDHXO00330 501 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 WDHD1O75717 1129 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-222ENST00000641587 PRDX5P30044 214 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 PPATQ06203 517 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.41
PHGDH-222ENST00000641587 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 MRPL50Q8N5N7 158 aaKnown RBP12.52□□□□□ -0.41
PHGDH-222ENST00000641587 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 MAST3O60307 1309 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 MGAMO43451 1857 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 LAMA3Q16787 3333 aa12.52□□□□□ -0.41
PHGDH-222ENST00000641587 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
PHGDH-222ENST00000641587 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 MRIQ9BWK5 157 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
PHGDH-222ENST00000641587 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-222ENST00000641587 GNRH1P01148 92 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 CYP2C8P10632 490 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 CCL5P13501 91 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 GRK4P32298 578 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-222ENST00000641587 PRKCZQ05513 592 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 DPF3Q92784 378 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 HOOK2Q96ED9 719 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
PHGDH-222ENST00000641587 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
PHGDH-222ENST00000641587 PTPRFP10586 1907 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 KIF16BQ96L93 1317 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 EYA2O00167 538 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 SLC5A1P13866 664 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 PRMT2P55345 433 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
PHGDH-222ENST00000641587 GPAT2Q6NUI2 795 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 UBE2Q1Q7Z7E8 422 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
PHGDH-222ENST00000641587 COL6A3P12111 3177 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 BCRP11274 1271 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 GJA8P48165 433 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 LPIN2Q92539 896 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 SIL1Q9H173 461 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-222ENST00000641587 BIN2Q9UBW5 565 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-222ENST00000641587 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
PHGDH-222ENST00000641587 GJB1P08034 283 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-222ENST00000641587 HOXD10P28358 340 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 PHKA1P46020 1223 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-222ENST00000641587 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 PARK7Q99497 189 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms