RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ABCF2Q9UG63 623 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 PDE4DIPQ5VU43 2346 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 LTBP1Q14766 1721 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 MYH7P12883 1935 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 GPAA1O43292 621 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
PHGDH-221ENST00000641573 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-221ENST00000641573 NEK4P51957 841 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 USP50Q70EL3 339 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-221ENST00000641573 PSMD1Q99460 953 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
PHGDH-221ENST00000641573 TRAF5O00463 557 aa15.64■□□□□ 0.09
PHGDH-221ENST00000641573 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
PHGDH-221ENST00000641573 CST9Q5W186 159 aa15.64■□□□□ 0.09
PHGDH-221ENST00000641573 DPP8Q6V1X1 898 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-221ENST00000641573 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
PHGDH-221ENST00000641573 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
PHGDH-221ENST00000641573 K7ELQ4 463 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-221ENST00000641573 CYP7A1P22680 504 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 EPS15P42566 896 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 CC2D2BQ6DHV5 1058 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 JAKMIP1Q96N16 626 aaKnown RBP15.63■□□□□ 0.09
PHGDH-221ENST00000641573 UPF3BQ9BZI7 483 aaKnown RBP15.63■□□□□ 0.09
PHGDH-221ENST00000641573 TM6SF1Q9BZW5 370 aa15.63■□□□□ 0.09
PHGDH-221ENST00000641573 IL1R1P14778 569 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 SCNN1DP51172 638 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 ADCK5Q3MIX3 580 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 TSGA10IPQ3SY00 556 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 SAPCD2Q86UD0 394 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
PHGDH-221ENST00000641573 JAG2Q9Y219 1238 aa15.62■□□□□ 0.09
PHGDH-221ENST00000641573 RIMBP2O15034 1052 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 FOXP2O15409 715 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 MBD4O95243 580 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 CELF2O95319 508 aaKnown RBP15.61■□□□□ 0.09
PHGDH-221ENST00000641573 PSMA5P28066 241 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 SPTY2D1Q68D10 685 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-221ENST00000641573 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-221ENST00000641573 ZGPATQ8N5A5 531 aaKnown RBP15.61■□□□□ 0.09
PHGDH-221ENST00000641573 HHIPL1Q96JK4 782 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 ARMT1Q9H993 441 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 ZSWIM6Q9HCJ5 1215 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 CTNNA3Q9UI47 895 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 CASP8AP2Q9UKL3 1982 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 SALL1Q9NSC2 1324 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
PHGDH-221ENST00000641573 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-221ENST00000641573 CYP21A2P08686 494 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 CASTP20810 708 aaKnown RBP15.6■□□□□ 0.09
PHGDH-221ENST00000641573 MCM2P49736 904 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 KRT32Q14532 448 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 SPRYD3Q8NCJ5 442 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 EYA3Q99504 573 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
PHGDH-221ENST00000641573 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 ADARB2Q9NS39 739 aaKnown RBP15.6■□□□□ 0.09
PHGDH-221ENST00000641573 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
PHGDH-221ENST00000641573 MAGEB6P1A0A0J9YX57 407 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 IGSF3O75054 1194 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 CPA1P15085 419 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 MECOMQ03112 1051 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 TTLL5Q6EMB2 1281 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 CIAPIN1Q6FI81 312 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 TMED8Q6PL24 325 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-221ENST00000641573 ADGRA1Q86SQ6 560 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 LCORLQ8N3X6 602 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 MIGA1Q8NAN2 632 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 ZNF384Q8TF68 577 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
PHGDH-221ENST00000641573 TTC14Q96N46 770 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 ZNF408Q9H9D4 720 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 CYP46A1Q9Y6A2 500 aa15.59■□□□□ 0.09
PHGDH-221ENST00000641573 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.08
PHGDH-221ENST00000641573 FGAP02671 866 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 APPP05067 770 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 GNAT2P19087 354 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 PRDX5P30044 214 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 SOX10P56693 466 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 NOGQ13253 232 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 IMMTQ16891 758 aaKnown RBP15.58■□□□□ 0.08
PHGDH-221ENST00000641573 PRPF38BQ5VTL8 546 aaKnown RBP15.58■□□□□ 0.08
PHGDH-221ENST00000641573 RUFY3Q7L099 469 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 PDRG1Q9NUG6 133 aa15.58■□□□□ 0.08
PHGDH-221ENST00000641573 LDHBP07195 334 aaKnown RBP15.57■□□□□ 0.08
PHGDH-221ENST00000641573 ALX1Q15699 326 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 BLOC1S2Q6QNY1 142 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 DZIP1Q86YF9 867 aaKnown RBP15.57■□□□□ 0.08
PHGDH-221ENST00000641573 NEK1Q96PY6 1258 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-221ENST00000641573 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 GPRC5DQ9NZD1 345 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 SLC4A4Q9Y6R1 1079 aa15.57■□□□□ 0.08
PHGDH-221ENST00000641573 FAM205AQ6ZU69 1335 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms