RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-224ENST00000640880 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 PDPK1O15530 556 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 DNAJC6O75061 913 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
SCARB2-224ENST00000640880 CLCQ05315 142 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
SCARB2-224ENST00000640880 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
SCARB2-224ENST00000640880 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-224ENST00000640880 CBX8Q9HC52 389 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-224ENST00000640880 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
SCARB2-224ENST00000640880 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 ESYT3A0FGR9 886 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
SCARB2-224ENST00000640880 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-224ENST00000640880 LRRC14Q15048 493 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 CEP135Q66GS9 1140 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 LLGL2Q6P1M3 1020 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 LSRQ86X29 649 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-224ENST00000640880 STK35Q8TDR2 534 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 APPBP2Q92624 585 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
SCARB2-224ENST00000640880 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
SCARB2-224ENST00000640880 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-224ENST00000640880 MARCH6O60337 910 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 B3GALT4O96024 378 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 IMPDH2P12268 514 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 FGFR3P22607 806 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 RASGRF1Q13972 1273 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 HOMER1Q86YM7 354 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 GRIN3AQ8TCU5 1115 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 GAL3ST3Q96A11 431 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 UBE2OQ9C0C9 1292 aaKnown RBP9.35□□□□□ -0.91
SCARB2-224ENST00000640880 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 CUL7Q14999 1698 aa9.35□□□□□ -0.91
SCARB2-224ENST00000640880 AXIN1O15169 862 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-224ENST00000640880 PPP2R5EQ16537 467 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 PCSK7Q16549 785 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 FXNQ16595 210 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 ZNF423Q2M1K9 1284 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
SCARB2-224ENST00000640880 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-224ENST00000640880 PRKAB1Q9Y478 270 aa9.34□□□□□ -0.91
SCARB2-224ENST00000640880 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 ARNTP27540 789 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 RBBP8NLQ8NC74 664 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-224ENST00000640880 EMILIN2Q9BXX0 1053 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 SOX13Q9UN79 622 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 PCDHB14Q9Y5E9 798 aa9.33□□□□□ -0.92
SCARB2-224ENST00000640880 PTPRAP18433 802 aa9.32□□□□□ -0.92
SCARB2-224ENST00000640880 VN1R5Q7Z5H4 357 aa9.32□□□□□ -0.92
SCARB2-224ENST00000640880 MICALL1Q8N3F8 863 aa9.32□□□□□ -0.92
SCARB2-224ENST00000640880 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
SCARB2-224ENST00000640880 GRIN3BO60391 1043 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 GJB6O95452 261 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 CPB1P15086 417 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 CASP7P55210 303 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 RPL6Q02878 288 aaKnown RBP9.31□□□□□ -0.92
SCARB2-224ENST00000640880 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-224ENST00000640880 MTERF2Q49AM1 385 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 ADAMTSL4Q6UY14 1074 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 SYT9Q86SS6 491 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 EHMT1Q9H9B1 1298 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 TMEM260Q9NX78 707 aa9.31□□□□□ -0.92
SCARB2-224ENST00000640880 POLR3KQ9Y2Y1 108 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-224ENST00000640880 DDAH1O94760 285 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 CTBSQ01459 385 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 SQSTM1Q13501 440 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 ARSHQ5FYA8 562 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 KIAA0907Q7Z7F0 614 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-224ENST00000640880 LACRTQ9GZZ8 138 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 METTL14Q9HCE5 456 aaKnown RBP9.3□□□□□ -0.92
SCARB2-224ENST00000640880 KLHL42Q9P2K6 505 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 LEMD3Q9Y2U8 911 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 FHAD1B1AJZ9 1412 aa9.3□□□□□ -0.92
SCARB2-224ENST00000640880 ESRRAP11474 423 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-224ENST00000640880 GYS2P54840 703 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 NOL8Q76FK4 1167 aaKnown RBP9.29□□□□□ -0.92
SCARB2-224ENST00000640880 ATP13A2Q9NQ11 1180 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms