RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.79
SCARB2-223ENST00000640640 HDAC9Q9UKV0 1011 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 TPCN1Q9ULQ1 816 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 LSG1Q9H089 658 aaKnown RBP19.98■□□□□ 0.79
SCARB2-223ENST00000640640 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
SCARB2-223ENST00000640640 ZNF174Q15697 407 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 WDR78Q5VTH9 848 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 AATFQ9NY61 560 aaKnown RBP eCLIP19.97■□□□□ 0.79
SCARB2-223ENST00000640640 PARP3Q9Y6F1 533 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 POTEJP0CG39 1038 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 SSR1P43307 286 aaKnown RBP19.97■□□□□ 0.79
SCARB2-223ENST00000640640 KRT40Q6A162 431 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 WDR66Q8TBY9 1149 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 MAP4K1Q92918 833 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 EYA3Q99504 573 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 ALS2CR12Q96Q35 445 aa19.97■□□□□ 0.79
SCARB2-223ENST00000640640 CPSF1Q10570 1443 aaKnown RBP19.97■□□□□ 0.79
SCARB2-223ENST00000640640 CD2BP2O95400 341 aaKnown RBP19.96■□□□□ 0.79
SCARB2-223ENST00000640640 TLR7Q9NYK1 1049 aaKnown RBP19.96■□□□□ 0.79
SCARB2-223ENST00000640640 KCNH3Q9ULD8 1083 aa19.96■□□□□ 0.79
SCARB2-223ENST00000640640 SYCP3Q8IZU3 236 aa19.96■□□□□ 0.79
SCARB2-223ENST00000640640 RPS8P62241 208 aaKnown RBP19.96■□□□□ 0.79
SCARB2-223ENST00000640640 AKNAD1Q5T1N1 836 aa19.96■□□□□ 0.79
SCARB2-223ENST00000640640 PPP4R3AQ6IN85 833 aa19.96■□□□□ 0.79
SCARB2-223ENST00000640640 RBM17Q96I25 401 aaKnown RBP19.96■□□□□ 0.79
SCARB2-223ENST00000640640 SAP30BPQ9UHR5 308 aaKnown RBP19.96■□□□□ 0.79
SCARB2-223ENST00000640640 MCM3P25205 808 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 PARP1P09874 1014 aaKnown RBP19.95■□□□□ 0.78
SCARB2-223ENST00000640640 SPAG5Q96R06 1193 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 MTMR6Q9Y217 621 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 WDR17Q8IZU2 1322 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 CYLC1P35663 651 aaPredicted RBP19.95■□□□□ 0.78
SCARB2-223ENST00000640640 GIGYF2Q6Y7W6 1299 aaKnown RBP19.95■□□□□ 0.78
SCARB2-223ENST00000640640 SMARCC2Q8TAQ2 1214 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 ZNF274Q96GC6 653 aaPredicted RBP19.95■□□□□ 0.78
SCARB2-223ENST00000640640 ADCK5Q3MIX3 580 aa19.95■□□□□ 0.78
SCARB2-223ENST00000640640 RGS12O14924 1447 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 PPP2R5BQ15173 497 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 PUS3Q9BZE2 481 aaKnown RBP19.94■□□□□ 0.78
SCARB2-223ENST00000640640 PDE6AP16499 860 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 GGA1Q9UJY5 639 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 SPDYE3A6NKU9 549 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 JADE2Q9NQC1 790 aa19.94■□□□□ 0.78
SCARB2-223ENST00000640640 CETN2P41208 172 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 EHBP1Q8NDI1 1231 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 PLIN2Q99541 437 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 FGAP02671 866 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 NOP2P46087 812 aaKnown RBP19.93■□□□□ 0.78
SCARB2-223ENST00000640640 E9PCH4 1651 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 ZNF202O95125 648 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 USP8P40818 1118 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 LETM2Q2VYF4 491 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 TAF3Q5VWG9 929 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 GREM2Q9H772 168 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 NEFHP12036 1026 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
SCARB2-223ENST00000640640 CUTAO60888 179 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 CBX8Q9HC52 389 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 CCDC175P0C221 793 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 PNPLA6Q8IY17 1366 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 TMCO5BA8MYB1 307 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 PDE8BO95263 885 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 GPR108Q9NPR9 543 aa19.92■□□□□ 0.78
SCARB2-223ENST00000640640 LIG1P18858 919 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 PIK3AP1Q6ZUJ8 805 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 ZBTB1Q9Y2K1 713 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 POLR2DO15514 142 aaKnown RBP19.91■□□□□ 0.78
SCARB2-223ENST00000640640 TTLL12Q14166 644 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-223ENST00000640640 CHAMP1Q96JM3 812 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 MMRN2Q9H8L6 949 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 MYSM1Q5VVJ2 828 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 TAX1BP1Q86VP1 789 aa19.91■□□□□ 0.78
SCARB2-223ENST00000640640 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 ERICH4A6NGS2 130 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 PFKFB2O60825 505 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 TUBB4AP04350 444 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 SIK1P57059 783 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 LRRIQ1Q96JM4 1722 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 KCNJ14Q9UNX9 436 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 IFNL3Q8IZI9 196 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 BICDL2A1A5D9 508 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 POLA2Q14181 598 aa19.9■□□□□ 0.78
SCARB2-223ENST00000640640 ABCA9Q8IUA7 1624 aa19.89■□□□□ 0.78
SCARB2-223ENST00000640640 ADD1P35611 737 aaKnown RBP19.89■□□□□ 0.78
SCARB2-223ENST00000640640 BCAMP50895 628 aa19.89■□□□□ 0.78
SCARB2-223ENST00000640640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.89■□□□□ 0.78
SCARB2-223ENST00000640640 CYP21A2P08686 494 aa19.89■□□□□ 0.77
SCARB2-223ENST00000640640 ADORA1P30542 326 aa19.89■□□□□ 0.77
SCARB2-223ENST00000640640 GYG1P46976 350 aa19.89■□□□□ 0.77
SCARB2-223ENST00000640640 MRPL12P52815 198 aaKnown RBP19.89■□□□□ 0.77
SCARB2-223ENST00000640640 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
SCARB2-223ENST00000640640 USP17L12C9JPN9 530 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms