RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
PAX6-260ENST00000639920 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
PAX6-260ENST00000639920 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
PAX6-260ENST00000639920 TMOD2Q9NZR1 351 aa12.55□□□□□ -0.4
PAX6-260ENST00000639920 ABCF2Q9UG63 623 aa12.55□□□□□ -0.4
PAX6-260ENST00000639920 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
PAX6-260ENST00000639920 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
PAX6-260ENST00000639920 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
PAX6-260ENST00000639920 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
PAX6-260ENST00000639920 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
PAX6-260ENST00000639920 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
PAX6-260ENST00000639920 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
PAX6-260ENST00000639920 LBX1P52954 281 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 MECOMQ03112 1051 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 NFIAQ12857 509 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
PAX6-260ENST00000639920 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
PAX6-260ENST00000639920 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 CSRNP1Q96S65 589 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 CCDC8Q9H0W5 538 aaPredicted RBP12.53□□□□□ -0.4
PAX6-260ENST00000639920 MROH7-TTC4A0A0A0MT08 1334 aa12.53□□□□□ -0.4
PAX6-260ENST00000639920 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
PAX6-260ENST00000639920 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 AACSQ86V21 672 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 FAM151AQ8WW52 585 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 IDI2Q9BXS1 227 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
PAX6-260ENST00000639920 LAMB1P07942 1786 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 GPR75-ASB3A0A0A6YYF3 556 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 IGSF3O75054 1194 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
PAX6-260ENST00000639920 BTDP43251 543 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
PAX6-260ENST00000639920 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 TSKSQ9UJT2 592 aa12.51□□□□□ -0.41
PAX6-260ENST00000639920 ENTPD3O75355 529 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
PAX6-260ENST00000639920 LDHCP07864 332 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
PAX6-260ENST00000639920 ZAP70P43403 619 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 TM4SF4P48230 202 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 RHBDL3P58872 404 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 GSTO1P78417 241 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
PAX6-260ENST00000639920 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 RNF186Q9NXI6 227 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 LRP2BPQ9P2M1 347 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
PAX6-260ENST00000639920 MAP4K4O95819 1239 aaPredicted RBP12.49□□□□□ -0.41
PAX6-260ENST00000639920 GJA5P36382 358 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 RGS3P49796 1198 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 TCP10Q12799 353 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
PAX6-260ENST00000639920 DCAF15Q66K64 600 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 ZFPM1Q8IX07 1006 aa12.49□□□□□ -0.41
PAX6-260ENST00000639920 CLASRPQ8N2M8 674 aaKnown RBP12.49□□□□□ -0.41
PAX6-260ENST00000639920 DDX4Q9NQI0 724 aaKnown RBP12.49□□□□□ -0.41
PAX6-260ENST00000639920 PIH1D3Q9NQM4 214 aaKnown RBP12.49□□□□□ -0.41
PAX6-260ENST00000639920 APBB1O00213 710 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
PAX6-260ENST00000639920 TRPA1O75762 1119 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 SREBF2Q12772 1141 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 VGLL4Q14135 290 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
PAX6-260ENST00000639920 COL2A1P02458 1487 aaPredicted RBP12.47□□□□□ -0.41
PAX6-260ENST00000639920 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
PAX6-260ENST00000639920 MANSC4A6NHS7 340 aaPredicted RBP12.47□□□□□ -0.41
PAX6-260ENST00000639920 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 NAA16Q6N069 864 aaPredicted RBP12.47□□□□□ -0.41
PAX6-260ENST00000639920 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.47□□□□□ -0.41
PAX6-260ENST00000639920 WRNIP1Q96S55 665 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 CSADQ9Y600 493 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 SNCAIPQ9Y6H5 919 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 NDUFB9Q9Y6M9 179 aa12.47□□□□□ -0.41
PAX6-260ENST00000639920 DOCK2Q92608 1830 aa12.46□□□□□ -0.41
PAX6-260ENST00000639920 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
PAX6-260ENST00000639920 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
PAX6-260ENST00000639920 INHBEP58166 350 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms