RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SPATA5Q8NB90 893 aa21.78■■□□□ 1.08
PTPN11-207ENST00000639857 TMEM39BQ9GZU3 492 aa21.78■■□□□ 1.08
PTPN11-207ENST00000639857 ZBTB40Q9NUA8 1239 aa21.78■■□□□ 1.08
PTPN11-207ENST00000639857 IGSF3O75054 1194 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 USP2O75604 605 aaPredicted RBP21.77■■□□□ 1.08
PTPN11-207ENST00000639857 SREBF2Q12772 1141 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 FAM163AQ96GL9 167 aaPredicted RBP21.77■■□□□ 1.08
PTPN11-207ENST00000639857 ZNF512BQ96KM6 892 aaPredicted RBP21.77■■□□□ 1.08
PTPN11-207ENST00000639857 HMG20BQ9P0W2 317 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 DOCK2Q92608 1830 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 CASP8AP2Q9UKL3 1982 aa21.77■■□□□ 1.08
PTPN11-207ENST00000639857 HMMRO75330 724 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 SPRYD7Q5W111 196 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 ERICH6Q7L0X2 663 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 SLC10A4Q96EP9 437 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 ABCF2Q9UG63 623 aa21.76■■□□□ 1.07
PTPN11-207ENST00000639857 TM4SF4P48230 202 aa21.75■■□□□ 1.07
PTPN11-207ENST00000639857 CACNB3P54284 484 aa21.75■■□□□ 1.07
PTPN11-207ENST00000639857 CDC42EP5Q6NZY7 148 aa21.75■■□□□ 1.07
PTPN11-207ENST00000639857 RNF186Q9NXI6 227 aa21.75■■□□□ 1.07
PTPN11-207ENST00000639857 MCAMP43121 646 aa21.74■■□□□ 1.07
PTPN11-207ENST00000639857 FAM151AQ8WW52 585 aa21.74■■□□□ 1.07
PTPN11-207ENST00000639857 FZD1Q9UP38 647 aa21.74■■□□□ 1.07
PTPN11-207ENST00000639857 RFX7Q2KHR2 1363 aa21.74■■□□□ 1.07
PTPN11-207ENST00000639857 MANSC4A6NHS7 340 aaPredicted RBP21.73■■□□□ 1.07
PTPN11-207ENST00000639857 MAP4K4O95819 1239 aaPredicted RBP21.73■■□□□ 1.07
PTPN11-207ENST00000639857 INHBEP58166 350 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 GSTO1P78417 241 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 TTC39AQ5SRH9 613 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.73■■□□□ 1.07
PTPN11-207ENST00000639857 WNK4Q96J92 1243 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 DBNDD2Q9BQY9 259 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 IDI2Q9BXS1 227 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 TSKSQ9UJT2 592 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 MROH7-TTC4A0A0A0MT08 1334 aa21.73■■□□□ 1.07
PTPN11-207ENST00000639857 MECOMQ03112 1051 aa21.72■■□□□ 1.07
PTPN11-207ENST00000639857 CLMNQ96JQ2 1002 aa21.72■■□□□ 1.07
PTPN11-207ENST00000639857 USP40Q9NVE5 1235 aa21.72■■□□□ 1.07
PTPN11-207ENST00000639857 DBNLQ9UJU6 430 aaKnown RBP21.72■■□□□ 1.07
PTPN11-207ENST00000639857 MYO5AQ9Y4I1 1855 aaKnown RBP21.72■■□□□ 1.07
PTPN11-207ENST00000639857 ENTPD3O75355 529 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 TRPA1O75762 1119 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 LDHCP07864 332 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 MAP3K9P80192 1104 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 PI16Q6UXB8 463 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 EXOC6BQ9Y2D4 811 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 CSADQ9Y600 493 aa21.71■■□□□ 1.07
PTPN11-207ENST00000639857 GPR75-ASB3A0A0A6YYF3 556 aa21.7■■□□□ 1.06
PTPN11-207ENST00000639857 ALDH1A1P00352 501 aa21.7■■□□□ 1.06
PTPN11-207ENST00000639857 NOM1Q5C9Z4 860 aaKnown RBP21.7■■□□□ 1.06
PTPN11-207ENST00000639857 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.7■■□□□ 1.06
PTPN11-207ENST00000639857 NSUN4Q96CB9 384 aaKnown RBP21.7■■□□□ 1.06
PTPN11-207ENST00000639857 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
PTPN11-207ENST00000639857 CFHR5Q9BXR6 569 aa21.7■■□□□ 1.06
PTPN11-207ENST00000639857 FOCADQ5VW36 1801 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 NPM3O75607 178 aaKnown RBP21.69■■□□□ 1.06
PTPN11-207ENST00000639857 NFIAQ12857 509 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 KIF1BPQ96EK5 621 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 LRP2BPQ9P2M1 347 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 FAM198AQ9UFP1 575 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 CDK5RAP2Q96SN8 1893 aa21.69■■□□□ 1.06
PTPN11-207ENST00000639857 BTDP43251 543 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 MKRN3Q13064 507 aaKnown RBP21.68■■□□□ 1.06
PTPN11-207ENST00000639857 VGLL4Q14135 290 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 ZNF384Q8TF68 577 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 ZNF341Q9BYN7 854 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 RAI14Q9P0K7 980 aa21.68■■□□□ 1.06
PTPN11-207ENST00000639857 COL2A1P02458 1487 aaPredicted RBP21.68■■□□□ 1.06
PTPN11-207ENST00000639857 RAB11FIP3O75154 756 aa21.67■■□□□ 1.06
PTPN11-207ENST00000639857 TCP10Q12799 353 aa21.67■■□□□ 1.06
PTPN11-207ENST00000639857 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
PTPN11-207ENST00000639857 TMED8Q6PL24 325 aaPredicted RBP21.67■■□□□ 1.06
PTPN11-207ENST00000639857 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
PTPN11-207ENST00000639857 RGS3P49796 1198 aa21.66■■□□□ 1.06
PTPN11-207ENST00000639857 AACSQ86V21 672 aa21.66■■□□□ 1.06
PTPN11-207ENST00000639857 CLASRPQ8N2M8 674 aaKnown RBP21.66■■□□□ 1.06
PTPN11-207ENST00000639857 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
PTPN11-207ENST00000639857 WRNIP1Q96S55 665 aa21.66■■□□□ 1.06
PTPN11-207ENST00000639857 CCDC8Q9H0W5 538 aaPredicted RBP21.66■■□□□ 1.06
PTPN11-207ENST00000639857 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
PTPN11-207ENST00000639857 TLR7Q9NYK1 1049 aaKnown RBP21.66■■□□□ 1.06
PTPN11-207ENST00000639857 ATRNL1Q5VV63 1379 aa21.65■■□□□ 1.06
PTPN11-207ENST00000639857 TESPA1A2RU30 521 aaPredicted RBP21.65■■□□□ 1.06
PTPN11-207ENST00000639857 SPDYE5A6NIY4 337 aa21.65■■□□□ 1.06
PTPN11-207ENST00000639857 WDHD1O75717 1129 aaPredicted RBP21.65■■□□□ 1.06
PTPN11-207ENST00000639857 GJA5P36382 358 aa21.65■■□□□ 1.06
PTPN11-207ENST00000639857 RHBDL3P58872 404 aa21.65■■□□□ 1.06
PTPN11-207ENST00000639857 IFNL1Q8IU54 200 aa21.65■■□□□ 1.06
PTPN11-207ENST00000639857 CYP2E1P05181 493 aaPredicted RBP21.64■■□□□ 1.05
PTPN11-207ENST00000639857 OTUD7BQ6GQQ9 843 aa21.64■■□□□ 1.05
PTPN11-207ENST00000639857 NAA16Q6N069 864 aaPredicted RBP21.64■■□□□ 1.05
PTPN11-207ENST00000639857 ERO1BQ86YB8 467 aa21.64■■□□□ 1.05
PTPN11-207ENST00000639857 NOL10Q9BSC4 688 aaKnown RBP21.64■■□□□ 1.05
PTPN11-207ENST00000639857 SNRKQ9NRH2 765 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms