RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 MIEF2Q96C03 454 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 CRB1P82279 1406 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 HMMRO75330 724 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 PDE6BP35913 854 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 PPP2R2DQ66LE6 453 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 TBC1D22AQ8WUA7 517 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 GBP3Q9H0R5 595 aa8.18□□□□□ -1.1
NECAP1-213ENST00000638883 ZSCAN16Q9H4T2 348 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 SUDS3Q9H7L9 328 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 DDX19AQ9NUU7 478 aaKnown RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 COLQQ9Y215 455 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-213ENST00000638883 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 FCHSD2O94868 740 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 MAP9Q49MG5 647 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 C16orf71Q8IYS4 520 aaPredicted RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 AFAP1L1Q8TED9 768 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 TACO1Q9BSH4 297 aaKnown RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 MSH6P52701 1360 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 ATAD2Q6PL18 1390 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 FAM83GA6ND36 823 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 ZRANB2O95218 330 aaKnown RBP eCLIP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 SYT1P21579 422 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 REXO1L1PQ8IX06 675 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 IQUBQ8NA54 791 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 TFIP11Q9UBB9 837 aaKnown RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.17□□□□□ -1.1
NECAP1-213ENST00000638883 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 MYH7P12883 1935 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 ZSCAN12O43309 604 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 CAVIN2O95810 425 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 ANAPC15P60006 121 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 LRRN4CLQ8ND94 238 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 PARD6BQ9BYG5 372 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 AKAP11Q9UKA4 1901 aa8.17□□□□□ -1.1
NECAP1-213ENST00000638883 PES1O00541 588 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CHUKO15111 745 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SETSIPP0DME0 302 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 GSPT1P15170 499 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 LARP1BQ659C4 914 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC150Q8NCX0 1101 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 NOC3LQ8WTT2 800 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 FAM204AQ9H8W3 233 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 TOM1O60784 492 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 GCFC2P16383 781 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SCRN1Q12765 414 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CEP85LQ5SZL2 805 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 IQCA1Q86XH1 822 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 NME9Q86XW9 330 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SIRT2Q8IXJ6 389 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 PDILTQ8N807 584 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 NUP133Q8WUM0 1156 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 PPP1R13BQ96KQ4 1090 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 LOC285556D6RIA3 1793 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SASH3O75995 380 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC73Q6ZRK6 1079 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 FAM169AQ9Y6X4 670 aa8.16□□□□□ -1.1
NECAP1-213ENST00000638883 PLA2G4DQ86XP0 818 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 KRI1Q8N9T8 703 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 MRFAP1L1Q96HT8 127 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 SDF4Q9BRK5 362 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 CRACR2AQ9BSW2 395 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 KINO60870 393 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 DTNBO60941 627 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 CEBPZQ03701 1054 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 IER5LQ5T953 404 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 RSRC1Q96IZ7 334 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
NECAP1-213ENST00000638883 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
NECAP1-213ENST00000638883 POTEB2H3BUK9 544 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 CTAGE5O15320 804 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 VAMP4O75379 141 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.11
NECAP1-213ENST00000638883 RWDD2BP57060 319 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 RRS1Q15050 365 aaKnown RBP8.15□□□□□ -1.11
NECAP1-213ENST00000638883 BRD3Q15059 726 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 MYSM1Q5VVJ2 828 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.11
NECAP1-213ENST00000638883 ITFG2Q969R8 447 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 L2HGDHQ9H9P8 463 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 ETAA1Q9NY74 926 aa8.15□□□□□ -1.11
NECAP1-213ENST00000638883 TNS2Q63HR2 1409 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms