RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 PEAK1Q9H792 1746 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 ABCC4O15439 1325 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 ABCA3Q99758 1704 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 H7C1W4 665 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SFPQP23246 707 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 GCKP35557 465 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SMTNP53814 917 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 ZNF772Q68DY9 489 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 TLDC1Q6P9B6 456 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 RAPGEF4Q8WZA2 1011 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 CRACR2AQ9BSW2 395 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SCAND2PQ9GZW5 306 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 TRPC5Q9UL62 973 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 CRYBG1Q9Y4K1 1723 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 COL5A2P05997 1499 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 RGPD5Q99666 1765 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 GNAI3P08754 354 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 PRKAR2BP31323 418 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SLC8A1P32418 973 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SLMAPQ14BN4 828 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 VPS72Q15906 364 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 MICALCLQ6ZW33 695 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 TRIM74Q86UV6 250 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 GJD4Q96KN9 370 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-211ENST00000637881 STK31Q9BXU1 1019 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
CDKL5-211ENST00000637881 CDK12Q9NYV4 1490 aaPredicted RBP9□□□□□ -0.97
CDKL5-211ENST00000637881 KIAA0754O94854 1291 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
CDKL5-211ENST00000637881 ABCD1P33897 745 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 RAB27AP51159 221 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 GNL2Q13823 731 aaKnown RBP9□□□□□ -0.97
CDKL5-211ENST00000637881 TBC1D25Q3MII6 688 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 MFN1Q8IWA4 741 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 DDX54Q8TDD1 881 aaKnown RBP9□□□□□ -0.97
CDKL5-211ENST00000637881 HOOK2Q96ED9 719 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 DNAJC25Q9H1X3 360 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 MTMR6Q9Y217 621 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 SLIT2O94813 1529 aa9□□□□□ -0.97
CDKL5-211ENST00000637881 USP54Q70EL1 1684 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 COL14A1Q05707 1796 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 LIN7AO14910 233 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 AHCYL1O43865 530 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CDKL5O76039 1030 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 NBPF7P0C2Y1 421 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CCT2P78371 535 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CEP85LQ5SZL2 805 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 SDCCAG8Q86SQ7 713 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 OR8K1Q8NGG5 319 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CAPN7Q9Y6W3 813 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 SPATA31A1Q5TZJ5 1347 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 SPATA31A5Q5VU36 1347 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 SPATA31A7Q8IWB4 1347 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 BECN2A8MW95 431 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 ANKRD65E5RJM6 399 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 PRPF6O94906 941 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 IL2RBP14784 551 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 MCM3P25205 808 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 RXRBP28702 533 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 IFFO1Q0D2I5 559 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 FAM182BQ5T319 152 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 SRGAP1Q7Z6B7 1085 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 TAX1BP1Q86VP1 789 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 PHACTR3Q96KR7 559 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 ZSCAN31Q96LW9 406 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 TSPAN18Q96SJ8 248 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 OSBPL9Q96SU4 736 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 BPIFA3Q9BQP9 254 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
CDKL5-211ENST00000637881 KLC4Q9NSK0 619 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 ANO10Q9NW15 660 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 DACT1Q9NYF0 836 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 USP16Q9Y5T5 823 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 IGSF1Q8N6C5 1336 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CDHR2Q9BYE9 1310 aa8.99□□□□□ -0.97
CDKL5-211ENST00000637881 CRB1P82279 1406 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 PDLIM1O00151 329 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 RNF40O75150 1001 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 GIGYF1O75420 1035 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-211ENST00000637881 FCHSD2O94868 740 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 FESP07332 822 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 PSMD2Q13200 908 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 MCM6Q14566 821 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 CASP8Q14790 479 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 TTC6Q86TZ1 520 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms