RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ATG9AQ7Z3C6 839 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 KLHDC4Q8TBB5 520 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
CLN8-214ENST00000637594 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 CIAO1O76071 339 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 SLC5A1P13866 664 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 LACTBP83111 547 aaPredicted RBP11.02□□□□□ -0.65
CLN8-214ENST00000637594 HABP4Q5JVS0 413 aaKnown RBP11.02□□□□□ -0.65
CLN8-214ENST00000637594 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.65
CLN8-214ENST00000637594 KCNH4Q9UQ05 1017 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 SALL1Q9NSC2 1324 aa11.02□□□□□ -0.65
CLN8-214ENST00000637594 MKI67P46013 3256 aaKnown RBP11.02□□□□□ -0.65
CLN8-214ENST00000637594 SEMA3EO15041 775 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 MAP3K10Q02779 954 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 KIF22Q14807 665 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 SLC9C1Q4G0N8 1177 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
CLN8-214ENST00000637594 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 ARAP2Q8WZ64 1704 aa11.01□□□□□ -0.65
CLN8-214ENST00000637594 RBBP6Q7Z6E9 1792 aaKnown RBP11□□□□□ -0.65
CLN8-214ENST00000637594 CENPFP49454 3210 aa11□□□□□ -0.65
CLN8-214ENST00000637594 OTOFQ9HC10 1997 aa11□□□□□ -0.65
CLN8-214ENST00000637594 CXCL11O14625 94 aa11□□□□□ -0.65
CLN8-214ENST00000637594 MOGSQ13724 837 aa11□□□□□ -0.65
CLN8-214ENST00000637594 MIGA2Q7L4E1 593 aa11□□□□□ -0.65
CLN8-214ENST00000637594 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
CLN8-214ENST00000637594 GNL3LQ9NVN8 582 aaKnown RBP11□□□□□ -0.65
CLN8-214ENST00000637594 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
CLN8-214ENST00000637594 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
CLN8-214ENST00000637594 CT47B1P0C2W7 299 aaPredicted RBP10.99□□□□□ -0.65
CLN8-214ENST00000637594 HOXD10P28358 340 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 INPP5BP32019 993 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 IDI2Q9BXS1 227 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 ARHGAP39Q9C0H5 1083 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 DENND2AQ9ULE3 1009 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 BRCA2P51587 3418 aa10.99□□□□□ -0.65
CLN8-214ENST00000637594 PHF20L1A8MW92 1017 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 PDHXO00330 501 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 LDHBP07195 334 aaKnown RBP10.98□□□□□ -0.65
CLN8-214ENST00000637594 IL15P40933 162 aaPredicted RBP10.98□□□□□ -0.65
CLN8-214ENST00000637594 NFIAQ12857 509 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
CLN8-214ENST00000637594 COPRSQ9NQ92 184 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 ADGRA2Q96PE1 1338 aa10.98□□□□□ -0.65
CLN8-214ENST00000637594 ENTPD3O75355 529 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 UBTFL1P0CB47 393 aaPredicted RBP10.97□□□□□ -0.65
CLN8-214ENST00000637594 CAPN2P17655 700 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 CTGFP29279 349 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 PRDX5P30044 214 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 PSMC4P43686 418 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 DIXDC1Q155Q3 683 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 ZFPM1Q8IX07 1006 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 ZGPATQ8N5A5 531 aaKnown RBP10.97□□□□□ -0.65
CLN8-214ENST00000637594 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 SLC45A1Q9Y2W3 748 aa10.97□□□□□ -0.65
CLN8-214ENST00000637594 PDS5AQ29RF7 1337 aaKnown RBP10.97□□□□□ -0.65
CLN8-214ENST00000637594 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 GAKO14976 1311 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.65
CLN8-214ENST00000637594 BCRP11274 1271 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 TCP10Q12799 353 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 FASTKD5Q7L8L6 764 aaKnown RBP10.96□□□□□ -0.65
CLN8-214ENST00000637594 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 SH3TC2Q8TF17 1288 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 CPA4Q9UI42 421 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 NOB1Q9ULX3 412 aaKnown RBP10.96□□□□□ -0.65
CLN8-214ENST00000637594 AFG3L2Q9Y4W6 797 aa10.96□□□□□ -0.65
CLN8-214ENST00000637594 KIAA0100Q14667 2235 aaKnown RBP10.95□□□□□ -0.66
CLN8-214ENST00000637594 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
CLN8-214ENST00000637594 TBC1D12O60347 775 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 MAP4K4O95819 1239 aaPredicted RBP10.95□□□□□ -0.66
CLN8-214ENST00000637594 PTPRAP18433 802 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 OSBPP22059 807 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 GRK4P32298 578 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 PHKA1P46020 1223 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
CLN8-214ENST00000637594 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 SCYL3Q8IZE3 742 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 API5Q9BZZ5 524 aaKnown RBP10.95□□□□□ -0.66
CLN8-214ENST00000637594 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
CLN8-214ENST00000637594 CTNND1O60716 968 aaKnown RBP10.94□□□□□ -0.66
CLN8-214ENST00000637594 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
CLN8-214ENST00000637594 GJB1P08034 283 aa10.94□□□□□ -0.66
CLN8-214ENST00000637594 GJA8P48165 433 aa10.94□□□□□ -0.66
CLN8-214ENST00000637594 FXR1P51114 621 aaKnown RBP eCLIP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms