RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 KRTAP12-3P60328 96 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 NFATC2Q13469 925 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 EIF4EBP2Q13542 120 aaPredicted RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 R3HDM1Q15032 1099 aaKnown RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 EFHC2Q5JST6 749 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 MORN1Q5T089 497 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 CNKSR3Q6P9H4 555 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 RAPH1Q70E73 1250 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 MEPCEQ7L2J0 689 aaKnown RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 RD3Q7Z3Z2 195 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 LIMS2Q7Z4I7 341 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 SYT9Q86SS6 491 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 ZDHHC17Q8IUH5 632 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 CCDC116Q8IYX3 515 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 PGBD3Q8N328 593 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 TAB3Q8N5C8 712 aaPredicted RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 ADAMTS19Q8TE59 1207 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 FBXO41Q8TF61 875 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 NUDT8Q8WV74 236 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 ANKRD9Q96BM1 317 aaPredicted RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 MAP6Q96JE9 813 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 KREMEN1Q96MU8 473 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 FCRL4Q96PJ5 515 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 SSBP3Q9BWW4 388 aaPredicted RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 LNPKQ9C0E8 428 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 SEMA4AQ9H3S1 761 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 EPB41L4AQ9HCS5 686 aaPredicted RBP-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 CLIP2Q9UDT6 1046 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 VAV3Q9UKW4 847 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 CEP131Q9UPN4 1083 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 CORINQ9Y5Q5 1042 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 COX11Q9Y6N1 276 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 SPATA31A6Q5VVP1 1343 aa-0.39□□□□□ -2.47
CDKL5-210ENST00000636046 PRRC2AP48634 2157 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 TMEM191CA6NGB0 347 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 FAM170BA6NMN3 283 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 DRGXA6NNA5 263 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 U2SURPO15042 1029 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 LINC01565O15544 149 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 SART1O43290 800 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 SIN3BO75182 1162 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF205O95201 554 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PLGP00747 810 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ARP10275 920 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 MAPTP10636 758 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 CHRM1P11229 460 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 MAKP20794 623 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PROZP22891 400 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PRPH2P23942 346 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 MAP4P27816 1152 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ADMP35318 185 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PTTG1IPP53801 180 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 POLGP54098 1239 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 DGCR2P98153 550 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PRKCQQ04759 706 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PMS2P11Q13670 270 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 AOC3Q16853 763 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF672Q499Z4 452 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 TMEM259Q4ZIN3 620 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 C9orf50Q5SZB4 431 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PPP1R26Q5T8A7 1209 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 NBPF14Q5TI25 921 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 LAIR1Q6GTX8 287 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 IGFL3Q6UXB1 125 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 MAMDC4Q6UXC1 1216 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PPP1R3FQ6ZSY5 799 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 C18orf65Q6ZTR6 163 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 TECPR1Q7Z6L1 1165 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF329Q86UD4 541 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 KRTAP13-1Q8IUC0 172 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 SRRM1Q8IYB3 904 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ULK2Q8IYT8 1036 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 FBXL16Q8N461 479 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 NBPF15Q8N660 670 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF511Q8NB15 262 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ABHD4Q8TB40 342 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 DNASE2BQ8WZ79 361 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 BAP1Q92560 729 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 PWWP2AQ96N64 755 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 TBC1D32Q96NH3 1257 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 EPAS1Q99814 870 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 SPATA25Q9BR10 227 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 DCTN5Q9BTE1 182 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 RUBCNLQ9H714 662 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 SLC7A10Q9NS82 523 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF70Q9UC06 446 aaPredicted RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 CCDC9Q9Y3X0 531 aaKnown RBP-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 MUC2Q02817 5179 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 ZNF536O15090 1300 aa-0.4□□□□□ -2.47
CDKL5-210ENST00000636046 RYR3Q15413 4870 aa-0.41□□□□□ -2.47
CDKL5-210ENST00000636046 DCDC2BA2VCK2 349 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 WDR91A4D1P6 747 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 NUTM2BA6NNL0 878 aaPredicted RBP-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 NUTM2EB1AL46 878 aaPredicted RBP-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 FZD9O00144 591 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 FFAR3O14843 346 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 NOBOXO60393 691 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 RHOBTB3O94955 611 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 GCP02774 474 aa-0.41□□□□□ -2.48
CDKL5-210ENST00000636046 DNAH10OSP0CZ25 163 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms